| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2974 |
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| Symbol | |
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| ID | 5671358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3500256 |
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| End bp | 3501020 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641241878 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001507298 |
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| Protein GI | 158314790 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGTA CCAAGGCGCA GCTGTCTCGG GTGGCCGTGG TCACCGGCGG GGCGTCGGGC
ATAGGCGAGG CCACCTGCCA CCACCTGGCT GAGCGCGGCC ACCGCATCGC CGTCCTCGAC
CTCGACCGTG ACGCGGCGAA CCGGGTGGCC AAGGAGCTGC AGGCTACCGG GGTGCAGGCG
CTCGGCCTCG CGGCCGACGT CACCGATCGT CCCGCCCTCG ATGCCGCCTT CGCCGAGATC
CGCTCGACGC TGGGCCCCAC GGAGATCCTG GTGACCAGCG CCGGCCTCGT CGCGTTCGAC
CCGTTCGACC AGATCACGCT CGAGCAGTGG AACCGCGTCG TCGAGGTGAA CCTCACCGGC
ACCTTCCACT CCTGCCAGGC CGCCGTCTCC GACATGGTCG CGGCACGGTG GGGCCGCATC
GTCACCATCG CGTCGTCGAG CGCCCAGCGC GGCTCGCCGA CCATGGCGCA CTACGCGGCG
GCCAAAGGCG GGGTGATCGT CCTGACGAAG TCGCTGGCAC GCGCCTACGC CTCCCACGGG
ATCACCGTCA ACAGCATCCC GCCGTCCGGG ATCGAGACGC CGATGCAGCA CCAGTCCCAG
GCAGAGGGGA ACCTGCCCCC CAACGAGGTG ATGGCCGGCA CCATCCCGCT CGGCCACCTG
GGCACCCCGG ACGACATCGC CGCCGCGGCC GCCTTCCTCG CCTCGGAAGA GGCCGGCTTC
ATCACCGGCC AGGTACTGGG AGTCAACGGA GGATCCGTAC TGTGA
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| Protein sequence | MPRTKAQLSR VAVVTGGASG IGEATCHHLA ERGHRIAVLD LDRDAANRVA KELQATGVQA
LGLAADVTDR PALDAAFAEI RSTLGPTEIL VTSAGLVAFD PFDQITLEQW NRVVEVNLTG
TFHSCQAAVS DMVAARWGRI VTIASSSAQR GSPTMAHYAA AKGGVIVLTK SLARAYASHG
ITVNSIPPSG IETPMQHQSQ AEGNLPPNEV MAGTIPLGHL GTPDDIAAAA AFLASEEAGF
ITGQVLGVNG GSVL
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