| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2952 |
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| Symbol | |
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| ID | 5671338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3473854 |
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| End bp | 3476646 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641241858 |
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| Product | ABC transporter related |
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| Protein accession | YP_001507278 |
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| Protein GI | 158314770 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACG TTCTTCCGTT CTTAGTCGCC GGTCTGACGA CCGGCGCGGT CTACGGGCTT
GCCGGTACCG GATTGGTGTT GACCTATAAG ACGTCGGGCG TCTTCAACTT CGCCCATGGC
GCGGTCGCTG CGCTGGCGGC GTACGTGTTC TATTCGCTGT GGGTAAGTCA GGGCTGGCCG
TGGCCGGTGG CGGTGGCGGT GGCGGTAGTG GCCGCGGGTC CGGTGCTGGG CCTGGTCCAG
GAGCTTCTCG CGCGTTTCAT CCAGGGCTCT AGTCTGGCCT TGCAGGTGGC GGCCACAGTG
GGGCTGTTGC TCGTAGTCCA GGCGGTACTG GTGCTGGTCT ACGGGACGTT GGAGACGCGG
ACGGTTCCGA TCTTCCTCGG CTCCGGGAAT GTGCGGCTGG CCGGGACGAA TGTTCGCTGG
GCGGACATAG CAACATTCGC GTTTGCCGTG GTGGTGACGG CGGGGCTGTC CGTGATGTTC
CGCCGAGCCC GGCTGGGGTT GGCGATGCGC GCCGTGGTGG ACGATCCAGC GTTGCTGGAT
CTGGCTGGAA CGAGCCCGCG GCAGACGCGC CGGTTCGCGT GGTGCATTGG GGCGACTCTG
GCGGCGGCGT CGGGGGTGCT GTTCGCGCCG TTGCTGCCTT TGGACGTGCT ACAGCTGACA
CTGCTGGTGG TGGCCGCCTT CGGTGCGGCG GCGATCGGCG CGTTCACGAG CCTGCCGCTG
ACGTTCGCCG GGGGGCTGGT GATCGGGGTG CTCGCCTCGC TGGCCACGAG GTACTTCACG
ACGGGGCTGC TGGCCGGGCT ACCGCCCGCG CTGCCGTTCG CGGTGCTGTT CCTGGTGCTT
CTCGTCTTCC CCCGGCGGTA TCTGTCCGGG CCGGTACGGG TCGTGCCGCG CAGCCGTCCG
GCCTGGGCCG CGCCGGCGCC ATTGCAGCTG CTGGCCGGGG TCGGACTGCT GGTCGCGTTG
GGGCTCGTGC CATCGTTCGC CGGCATTCAC CTCACCGACT GGACGGCGGC GCTGGGCACG
GCGATTGTGT TCCTGTCCTT GGGGTTGCTG GTTCGTACAT CCGGGCAGGT CTCGCTGTGC
CATGTGAGTT TCATGGCGAT CGGCGCCGCG GCCTTCTCCC ACCTTGCTGT CGGACACGAC
CTGCCCTGGC TCGTCGCGTT GCTAGTCACA GGGCTGATCG CCGTACCAGT CGGGGCGATG
CTGGCTGTCC CGGCGGTCCG CTTGAGCGGC CTATATCTTG CGTTGGCGAC GTTCGGGTTC
GGGATCTTCC TACAGTACAT GCTCTATACC CAGGACTACA TGTTCGGCTC GATGGGCGCG
GGATTGAGCG AGCCGCGGCC GCACCTGTCG TGGCTGAACG TGGAGGATGA CAAGGGCTTC
TACTACCTGG TCCTCGTCAT GGCCGTCGCG GCCGTCACCC TCCTAGTAAT CTTGGACCGG
AGCCGGCTGG GCAGGCTGTT GCGGGGACTG GCGGAGTCGC CGACCGCGTG GGAGACCTCC
GGGGTGACAG TGAGCGTCAC CCGCGTGCTG GTGTTCTGTG TTTCGGCGTT CATGGCGGCG
GTCGGTGGAG CGCTGACCGC GGTCGCGCAG AGCACCGTGT CCGCCGACGC GTACCAGCCG
ATGCTGTCGC TGACCTATTT CGCGGTCGTC ATCGTCGCGC TGGGCGGCAA CCCCTGGTAC
GCGCTGACCG GGGCGGGTGC CCTCGAACTG ATCCCGTCCT ATATCTCTGG CGAGAACACC
GCCGCGGTCC TGCAACTGGG TTTCGGTCTG GCAGCGGTGG GCGTTGCGTT AGCTCCCCCA
ACGGCGAGCC TGCTCCCCGT CGCCGTGCGG CGTCGCATAG ACGCGGTGTC CCGCCGTCCG
CGGCCGTCAG GGGCACGGGC ACCGGAAGGT GCCGCGGCGG TCCCAGCGGC CGCTGCATCG
TGGCCGGGGA ACGGGGCGGC GGAAAGACAG GTGGCTGCTG GCGCCCTAGA GGTGCAGGAC
CTGAAAGTCC GGTTCGGCGG CGTGCTCGCG GTGGACGGTC TCAGCCTGGC CGCGCCGACC
GGCCGGATCA CGGGTCTCAT CGGCCCGAAC GGCGCCGGCA AGACCACAAC GTTTAACGCA
TGCTCGGGCC TGGTGCGTCC AAACAGCGGG CGCGTGTTGC TCGCCGGGCA CGACGTCTCT
CGCGCCGGAC CGGCGGCCCG GGCCCGGCGC GGGCTGGGCC GAACCTTCCA ACGGATGGAG
CTGTTCGACT CGCTGCCAGT CCGGGACAAC GTGGCCGCCG GCGCGGAAGG CGCGCTCGCC
GGCGGCAACC CGCTGACGCA CTTGGCCAGC CGGCCGGAGG ACCGCGTGCA GGTCCGCCGC
GCCACCGACG ATGCACTGGA GATGTGCGAC CTGACCGCCC TTGCCGACAC GGTGACGGCG
AAGCTGTCAA CCGGGCAGCG GCGGCTGGTG GAGCTGGCCC GCTGCCTCGC GGGCCCGTTC
CAGATCCTGC TGCTCGATGA GCCGTCTTCA GGGCTGGACC GGGTGGAGAC CGTCCGGTTC
GGGGAGATCT TGCGCCGCGT CGTCGCAGAG CGCGGCGTTG GGATCCTGCT CGTCGAACAC
GACATGGCAC TTGTCCTCGA CATCTGCGAG ATGATCTACG TTCTCGACTT CGGTCGACTC
GTGTTCGCCG GGAGCCCGGG CGAGGTCGTC GCATCTTCGG TCGTGCAGGC CGCCTACCTC
GGCGACACGG CTGTCGAAGC CGCCGTCCCA CAGACGGCGC AAGGTGAGGC AACCGTGAGC
GGGCTCGTGT CGGATGAGGA GGTCGTGGCA TGA
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| Protein sequence | MSDVLPFLVA GLTTGAVYGL AGTGLVLTYK TSGVFNFAHG AVAALAAYVF YSLWVSQGWP
WPVAVAVAVV AAGPVLGLVQ ELLARFIQGS SLALQVAATV GLLLVVQAVL VLVYGTLETR
TVPIFLGSGN VRLAGTNVRW ADIATFAFAV VVTAGLSVMF RRARLGLAMR AVVDDPALLD
LAGTSPRQTR RFAWCIGATL AAASGVLFAP LLPLDVLQLT LLVVAAFGAA AIGAFTSLPL
TFAGGLVIGV LASLATRYFT TGLLAGLPPA LPFAVLFLVL LVFPRRYLSG PVRVVPRSRP
AWAAPAPLQL LAGVGLLVAL GLVPSFAGIH LTDWTAALGT AIVFLSLGLL VRTSGQVSLC
HVSFMAIGAA AFSHLAVGHD LPWLVALLVT GLIAVPVGAM LAVPAVRLSG LYLALATFGF
GIFLQYMLYT QDYMFGSMGA GLSEPRPHLS WLNVEDDKGF YYLVLVMAVA AVTLLVILDR
SRLGRLLRGL AESPTAWETS GVTVSVTRVL VFCVSAFMAA VGGALTAVAQ STVSADAYQP
MLSLTYFAVV IVALGGNPWY ALTGAGALEL IPSYISGENT AAVLQLGFGL AAVGVALAPP
TASLLPVAVR RRIDAVSRRP RPSGARAPEG AAAVPAAAAS WPGNGAAERQ VAAGALEVQD
LKVRFGGVLA VDGLSLAAPT GRITGLIGPN GAGKTTTFNA CSGLVRPNSG RVLLAGHDVS
RAGPAARARR GLGRTFQRME LFDSLPVRDN VAAGAEGALA GGNPLTHLAS RPEDRVQVRR
ATDDALEMCD LTALADTVTA KLSTGQRRLV ELARCLAGPF QILLLDEPSS GLDRVETVRF
GEILRRVVAE RGVGILLVEH DMALVLDICE MIYVLDFGRL VFAGSPGEVV ASSVVQAAYL
GDTAVEAAVP QTAQGEATVS GLVSDEEVVA
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