| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2946 |
|---|
| Symbol | |
|---|
| ID | 5671332 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 3466550 |
|---|
| End bp | 3468064 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641241852 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001507272 |
|---|
| Protein GI | 158314764 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.623525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCATCG CGGCGGCTTC CACCGCAACG CCCCAGGTCA TCGTGATCGG TGCCGGCTTC
GGCGGCATGT CGGTCGCGCT GGAGCTCAAG GCCTGCGGCA TCGACACGTT CACCGTGCTG
GAACGCGCCC CCGAGGTGGG CGGTGTGTGG CAGGCGAACG ACTATCCGGG GGCGGCCTGC
GACGTTCCGA GTGTTATCTA CCAGTTCTCG AGCCACCTCA AGGCCAACTG GTCGCGGCGC
TTCGGTTCAC AGGCGGAGAT CCGTGACTAT GTCCGGCAGG TGTCGATCGA GAGCGGGGTA
CGGCCGCACA TCCGTTTCGG TACCGAGGTG GTCTCCGCCA GCTTCGGCGA GTCGACGAAC
CGGTGGACTG TCGAGCTCGC CGACGGCGAG CAGCTCTCCG CGGATGTCCT GGTCGCCGCC
ACGGGCCAGT TGAGCCGGCC CAGAACTCCG CAGATCGAAG GGCGGGACAC GTTCACCGGC
GCACAGTTCC ACTCCGCCGA GTGGGACCAC TCTGTCGACC TACGTGGCCG GCGGGTGACG
GTCGTCGGTG GTGGCGCCAG CACGATCCAG GTCGTTCCGG CCATCGTGGA CACGGCCGCC
CACACCACGT TGATCCAGCG TTCGCCCAGC TGGGTGGTCG GCAAGTACGA CTGGTCGCCG
GGTCCGCTTG AGCGGAGCCT CTCTCGGGTG CCGGGCTTTC TGCGCCTTTA CCACGGCGCC
ATGTGGCAGT GGTTCGAGGC CAAGTATCCC TTCGTCCTAC GCCGATACGA CGCAGGACGG
ACACTCTACG AGGCGTTCTG GCGCAGGCGG ATTCGCGCGG CCCTGAAGGA CGAGCAGAAG
ATCGCCGCCT GCCTGCCCGA CTACCGCATT GGCTGTGCCC GCATCCTGCT CTCCAAGGCC
TGGTACCCCA CCCTCGCCCG GGAGGACGTG TCGGTCTTCC GGGACGGCGT GACCGTCATG
ACCGAGGACG GCGTCCTCAC CTCCGACGGG CGGCACATTC CAACGGACGT CGTCATCTGG
TGCACCGGTT TCACCGCGAC CGAGTACCTC GCGCCGATTC GCGTTACTGG GCGTGGCGGG
CTCGACCTGC ACACAGTCTG GAAGGACGGT CCCGAGGCGT ACCTCGGCCT GGCGGTTCCG
GGATTCCCGA ACTTCTTCAT GTCCTACGGC CCGAACACGG GCTCTCTGAC GAACACCATC
ACCAGCATGC TCGAGTACCA GGCGAGTTAC ATTCGGCAGG CGATCGAGCA CATCGGGCGG
AGCCGCCTGG CCTATTCGGT TCGACAGGAC GTCCACGATT CCTTCAACGC CGAGCTGGGG
CGCCGTCTAC CGCAGACCGT CTTCAGTACC GGCTGCCCCG GCTGGTACGC AACACCCAGC
GGAAAAATCA CGACAGTGTG GGTGGGCTCA CACCGGGAGT ACCGCCGCCG CACCCGGTTC
TTCGACCCCA CCGTCTACGA CGAGGCGGTC CCGGCCCCCA CGTGGTCGAC GCCCGACGTC
TCCCTCACGC AGTGA
|
|---|
| Protein sequence | MTIAAASTAT PQVIVIGAGF GGMSVALELK ACGIDTFTVL ERAPEVGGVW QANDYPGAAC
DVPSVIYQFS SHLKANWSRR FGSQAEIRDY VRQVSIESGV RPHIRFGTEV VSASFGESTN
RWTVELADGE QLSADVLVAA TGQLSRPRTP QIEGRDTFTG AQFHSAEWDH SVDLRGRRVT
VVGGGASTIQ VVPAIVDTAA HTTLIQRSPS WVVGKYDWSP GPLERSLSRV PGFLRLYHGA
MWQWFEAKYP FVLRRYDAGR TLYEAFWRRR IRAALKDEQK IAACLPDYRI GCARILLSKA
WYPTLAREDV SVFRDGVTVM TEDGVLTSDG RHIPTDVVIW CTGFTATEYL APIRVTGRGG
LDLHTVWKDG PEAYLGLAVP GFPNFFMSYG PNTGSLTNTI TSMLEYQASY IRQAIEHIGR
SRLAYSVRQD VHDSFNAELG RRLPQTVFST GCPGWYATPS GKITTVWVGS HREYRRRTRF
FDPTVYDEAV PAPTWSTPDV SLTQ
|
|---|
| |