Gene Franean1_2945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2945 
Symbol 
ID5671331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3465681 
End bp3466553 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content71% 
IMG OID641241851 
Productalpha/beta hydrolase fold 
Protein accessionYP_001507271 
Protein GI158314763 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCA TGGAGACGCT CACGCATTTC GTGAGGCGTG GCACGGGCGA GCCCACCGTG 
CTGCTGCACG GCGTCGGCAG TCGTGCCCAG GTCTGGGATC CCCTGGTCGT GGATCTGGCC
CGGCAGCGGG AGGTCGTCGC CGTCGACCTG CCGGGCTTCG GGCACTCCCC CCGTGGGGAT
GTCCGAGCCA CGGTCGCGGG GTATGCGGAT CATGTCAGCG AAGTGTGCGG ACAGCTCGGG
CTGCGGCGCC CCCATGTCGC CGGGCACTCC CTCGGCGGCG CGGTGGCCTT GGAACTCGGC
CGCCGCGGGG AGGCCCGATC CGTCGTCGCC TTCTCGCCCG TCGGGTTCTG GGGACCGAGC
GGGCAGGTCT GGTGCCAGGG CGTGCTCAGC CTCATGCGCG TCGTCGGACC GAAGGTTCGA
CCAGTACTTC CGGCTCTCCT TGCGACGGGG CCGGGGAAGG CCGCGCTCTT CGGCATGTTC
TACGGCGCGC CGCACCGGGT CCCGGCCCCG ACCCTCGTCG CCGACGCCGA CTCCTTCGCC
ACGTGTCAGG CGCTGCCGGA CGCCGTCAGC GGATTCGCGG ACCATGTCTT CACCGAGCGT
GGCGCGCTCG ACGACATTCC GGTAACCGTG GCGTGGGGCG GGCGGGATCT TGTGCTGCCG
CGCCTCACAC AAGGCCGGCG GGCGAGGCGC GCGCTGCCCC GGGCCCGTCA CGTGACGCTG
CCCGGAGCTG GGCACGTCCC CTTCTACGAC GATCCGGTGT CCTGTCTCAT GCTCCTTCTC
CACCAATGGG GAGAAGCCGG TCCCCTCGCC TCGTCTCCGT CAGCCAGCCC CGGCGTGGGC
ACCGACACCT GCGTCTCGAG GAGCGTTTCG TGA
 
Protein sequence
MTLMETLTHF VRRGTGEPTV LLHGVGSRAQ VWDPLVVDLA RQREVVAVDL PGFGHSPRGD 
VRATVAGYAD HVSEVCGQLG LRRPHVAGHS LGGAVALELG RRGEARSVVA FSPVGFWGPS
GQVWCQGVLS LMRVVGPKVR PVLPALLATG PGKAALFGMF YGAPHRVPAP TLVADADSFA
TCQALPDAVS GFADHVFTER GALDDIPVTV AWGGRDLVLP RLTQGRRARR ALPRARHVTL
PGAGHVPFYD DPVSCLMLLL HQWGEAGPLA SSPSASPGVG TDTCVSRSVS