| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2938 |
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| Symbol | |
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| ID | 5671324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3454641 |
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| End bp | 3455426 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641241844 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001507264 |
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| Protein GI | 158314756 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCGG CGGTGGGCCC GTTGGCTGGG CGGACGGCGG TGGTGACGGG CGGCTCGCGA
GGGGTCGGTG CCGCGATCGG CGCGCACCTG GCGGGGCTCG GGGCCGCCGT GGGGCTGACA
TACCACCGCG CTGCCACCGC CGCGGACGAG GCGGTCACGG CGATCCGCGC GGGCGGTGGA
CGCGCCGTGG CGTTTGCCGC CGACATTGCC GACAACCGGG CCGGCGCCAC CCTCGTCGAG
GACATCCATG ACTCTCTCGG CCCGGTCGAC ATCGTCGTCA GCAACGCCGG GGTCGCCAGC
CGGGGGCTGA CGGTGGCCGA CACGTCGGCG CAGGAGTTCC AGCACCTGAT GCAGGTCCAC
GCCTTCGGGC CGCTCGCGCT GATCCGGCTC CTCCTGCCCG ACCTGCGGAC AGCCGGCCGC
GGCGACGTCG TCGTGGTCTC GAGTACGACC GCCGCGTCGG CGCCCGCTCG GTGCGCGCCC
TACACGATGG CCAAAGCCGC GATGGAGGTC GCCGCGCGCA CCCTCGCCCG GGAGGAGCGC
CGACACGGGA TCCGGGTCAA CATCGTCGCC CCTGGGCTCG TCGCGACCGA CATGGGCTCG
CGGCTGGTCC GCGCGACGAG CGGGAAACAC GTCCATGACC TCGACGGCGA CGCGCCGTTC
GGCCGGGTGT GCACCCCCGA CGACGTGGCC GCGGTCGTCG CGTTCCTGCT CGGGCCGGGC
GCCGGGTACG TCACCGGCCA GCGGATCGTC GTCGACGGAG GCGGGCCGGA TCCGCAGGTC
TACTGA
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| Protein sequence | MTAAVGPLAG RTAVVTGGSR GVGAAIGAHL AGLGAAVGLT YHRAATAADE AVTAIRAGGG
RAVAFAADIA DNRAGATLVE DIHDSLGPVD IVVSNAGVAS RGLTVADTSA QEFQHLMQVH
AFGPLALIRL LLPDLRTAGR GDVVVVSSTT AASAPARCAP YTMAKAAMEV AARTLAREER
RHGIRVNIVA PGLVATDMGS RLVRATSGKH VHDLDGDAPF GRVCTPDDVA AVVAFLLGPG
AGYVTGQRIV VDGGGPDPQV Y
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