| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2936 |
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| Symbol | |
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| ID | 5671322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3451359 |
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| End bp | 3453044 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641241842 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001507262 |
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| Protein GI | 158314754 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACTTCA GAGAGAGCCT GGTCGACGAG CTACGGATCG GCGTCATCAT CACGGGCGCG
CACAGCAGGA TCGTCAGGTA CGTCAACGCG ACTGCGTGCC AGATCCTGGG TCGCGAGCCG
GACGAGATGC TCGGCCGCTC CTGGCAAACC CTCGTCCCCC AGACGGACTA TGAGCTCTTC
ACCAGATACG AGCGCAGGGT CATCGGCCAG GGCCCCGGTG GCTCCGACAA GCGGTTCCCG
CCGTTCCGAA TGAGGTTCGC TCGGCCGGGA GGAGAGATCG TCCACGTTTG GGTTACCTCC
ACACTCGCCC ACAACTTCGT GGGGCTGTTC GGAGACGACG AGCCCCAGTT GGTGAGTCGC
CTGGAGGACG TGGCCGACCG TGAGCAGATC GCCAGCTATC TCGGGCTCGC CCTGGACAAC
AGCCCGATGT CGGTGGGTCT GGTTGACCCG TTCGGTCGCA TCGTGTTCGC TACACGCGGG
CGCTCCCCTC AAGAGACCGA GGACACGCTC AATGCCGAGG CAACATCTGT CTTCGAGGTC
TTCGCGGACT ACCAGGAACC GCTGTCGATG GTCGAGGCCG CCTTCAAAGG TGAGTCTGAC
TCGCTGGTCG TCCAGGCGTA CGGCCGCTAC TTCGACTTCC ATGTGGTTCC CATCACCGAC
GCGGCCGGCC AGGTCCGGCT GGCTGCCGCA CTCGCCACCG ATGTCACCGA ACGGGAACTC
GCCCGCGCCG GCCAAGCCCA GCTCGCCAGC CTCGCTGAGC AGGCGCTGGT TACGCTCGAA
CCGGTCGACC TCTGGCAACA CGCCACCACC GTGCTGGCCA ACCAGCTCGA CGCCGCGGCG
ACGCTGCACG AGATCGACGT CGCGGTGGCC ACCGCTCACG GCACGAAACT CACCGCCACC
GCCACCGCCA CCGCCGGCCC GCCCGTCCCG AGCGACGTCG CAGAGAACGT ACTGTCGACC
GTCATCCGCA CCGGACGCAC GACCCTCAGG ACAGCGGACC TGACGGAGGG CTGGCGGACC
CTGGCCGCAC CGATAGGCCG GCCCGGCGTC TGTAGGGCCG TGGTCGCCGT ACATCGCCCG
GGGCCGGACC GGGAGCCGTT CGGTGACCGG GACGAGGAGT TCCTCGTTGC GGTCGCGAGC
GTGCTGGGCT CGGCGGCGGC GCGGTTCGCC GCCGAACAGG AGATCCGCTA CCGCTCGACG
CACGACACCC TCACCGACCT GCCCAACCGC TCATGGCTGC TCGAGCGGCT CGCCCGCAGC
CTCAAGCTGC ACCGCACAGG CGTGGTCTTC ATCGATCTCG ACGGCTTCAA GACCGTCAAC
GACACCTACG GCCACCAGGC CGGCGACCGG CTGCTGTGCG AGATCGCCCG CCGGCTCGAG
GCGGCGGTGC GGCCAGACGA TCTGGTCGCC CGCCTCGCCG GGGACGAGTT CGCCGTGCTC
TGCGAGCGCG TCGACTCGCC TGCGGCCGTC GAACGGCTCG CCCGGCGAGT GCTCGCAGAG
ATCGAGGAGC CTGTGGTACT TGCGGAGGGA ACCGTACGCG TCTCGGCAAG CGCCGGAGTG
GCGATCTCCC GCGCGGACCT CTCCGATCCG GACCGCCTGC TCAACGCCTC CGACATCGCG
ATGTACGCAG CGAAGCGCGC CGGAGCTGGA CAGTGCATCG TCCACGAGTC CTGGATGCAC
CTCTGA
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| Protein sequence | MDFRESLVDE LRIGVIITGA HSRIVRYVNA TACQILGREP DEMLGRSWQT LVPQTDYELF
TRYERRVIGQ GPGGSDKRFP PFRMRFARPG GEIVHVWVTS TLAHNFVGLF GDDEPQLVSR
LEDVADREQI ASYLGLALDN SPMSVGLVDP FGRIVFATRG RSPQETEDTL NAEATSVFEV
FADYQEPLSM VEAAFKGESD SLVVQAYGRY FDFHVVPITD AAGQVRLAAA LATDVTEREL
ARAGQAQLAS LAEQALVTLE PVDLWQHATT VLANQLDAAA TLHEIDVAVA TAHGTKLTAT
ATATAGPPVP SDVAENVLST VIRTGRTTLR TADLTEGWRT LAAPIGRPGV CRAVVAVHRP
GPDREPFGDR DEEFLVAVAS VLGSAAARFA AEQEIRYRST HDTLTDLPNR SWLLERLARS
LKLHRTGVVF IDLDGFKTVN DTYGHQAGDR LLCEIARRLE AAVRPDDLVA RLAGDEFAVL
CERVDSPAAV ERLARRVLAE IEEPVVLAEG TVRVSASAGV AISRADLSDP DRLLNASDIA
MYAAKRAGAG QCIVHESWMH L
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