Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2930 |
Symbol | |
ID | 5671317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 3445999 |
End bp | 3447462 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641241837 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_001507257 |
Protein GI | 158314749 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGAGC GTGGGAAGTC GGATCGTCTT GTAGTACCTG CGAACCCGCC GAACAAGGCC ACAGCTGCGG AGGTGGGGGA GGGAAGGGGA CGAGCCAAGG GGAACACGGA CAGTAAAACG CATCCCGGAC ACAGCGCCGG AACTGATGCG TCCAGTGCGC TGGGCCGTGT GCGTGAAGTG GCACGACGGG ACAGGAACGC GCGGTTCACC GCGCTGCTGC ACCATGTCAC GCTGGGTCGG CTCCGGGAGG CGTATCGGGC GATCAGCCCG AAAGCGGCTG CTGGGGTGGA CGGGGTGACG TGGACCGACT ACGGGCAGGA CCTGGAGGCC AATCTGCAGG ATCTGCACGT GCGGGTGCAG TCGGGATGTT ACCGGGCGAC ACCGTCGAGG CGGGCGTACA TACCGAAGGC GGACGGGCGG CTTCGGCCGC TCGGGATCGC CTCGCTGGAG GACAAGATTG TTCAGCGGGC GGTTGTCGAG GTGCTGGGCG CCGTCTACGA GGTGGACTTC CGGGGCTTCT CGTATGGGTT CCGGCCGGGG CGGGGTCCGC ATGACGCGTT GGACGCCCTC GCGGTCGGGA TCTGGAGGAA GCGGGTGAAC TGGGTGCTCG ACGCGGACAT CCGCGACTTT TTCGGCCAGA TTGATCATTC CTGGCTGCGG AGGTTTCTGG AGCACCGGAT CGCGGACAAG CGGGTCCTGC GGCTGATCGA CAAGTGGTTG GCCGCGGGGG TCGTCGAGGA TGGGGAGTGG ACAGCGTGTG AGGAAGGTTC GCCACAAGGG GCGTCAGTGT CCCCGCTGCT GGCGAACGTC TACTTGCACT ATGTCCTCGA CCTGTGGGTC GACTGGTGGC GGCGTCGCCA CGCGCGCGGA GATGTCATTG TCGTGCGCTG GGCCGACGAC TTCATCGTCG GGTTCGAATA CGAGGAGGAT GCGCGGCGGT TCCTGGACGA GCTGCGCGAA CGGTTCGCGA AGTTCGGGTT GGAACTGCAC CCGGATAAGA CGCGGCTGAT CGAGTTCGGG CGGTACGCCG CCCGGGATCG GAAGCGGCGG GGTCTGGGCA AGCCGGAGAC GTTCGACTTT CTGGGGTTCA CGCACATCTG TGCGACATCC CGGAGGGGGA CGTTCTGGCT CAAGCGCATC ACGATCGCGA AACGCATGCG GGCGAAGCTG AAGGCGGTCA ATGAGCAGCT GAAGCGTCGC CGGCATACGC CCATCCCGGA TCAGGGACGC TGGTTGGCGA GCGTGCTACG TGGGCATATG GCCTACTACG CCGTGCCCGG CAACACCGAC ACGATGTCGG CCTTCCGTAC CCAGGTGACA CGGCACTGGT GCAAGGCGCT GCGGCGCCGC AGCCAACGTG ACCGGATGAA CTGGCAACGG ATGGGGCGGA TCGCGGCTCG ATGGCTACCC CCAGTCCGAG TGATGCATCC CTTCCCGGAG AGACGCTTCG CAGCCAGAAC CTGA
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Protein sequence | MHERGKSDRL VVPANPPNKA TAAEVGEGRG RAKGNTDSKT HPGHSAGTDA SSALGRVREV ARRDRNARFT ALLHHVTLGR LREAYRAISP KAAAGVDGVT WTDYGQDLEA NLQDLHVRVQ SGCYRATPSR RAYIPKADGR LRPLGIASLE DKIVQRAVVE VLGAVYEVDF RGFSYGFRPG RGPHDALDAL AVGIWRKRVN WVLDADIRDF FGQIDHSWLR RFLEHRIADK RVLRLIDKWL AAGVVEDGEW TACEEGSPQG ASVSPLLANV YLHYVLDLWV DWWRRRHARG DVIVVRWADD FIVGFEYEED ARRFLDELRE RFAKFGLELH PDKTRLIEFG RYAARDRKRR GLGKPETFDF LGFTHICATS RRGTFWLKRI TIAKRMRAKL KAVNEQLKRR RHTPIPDQGR WLASVLRGHM AYYAVPGNTD TMSAFRTQVT RHWCKALRRR SQRDRMNWQR MGRIAARWLP PVRVMHPFPE RRFAART
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