Gene Franean1_2929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2929 
Symbol 
ID5671316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3444933 
End bp3445616 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content69% 
IMG OID641241836 
Producthypothetical protein 
Protein accessionYP_001507256 
Protein GI158314748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTCTCCC GGATCAGCAC GAACTGGCGC GGCCGCCCCC TGACCAGCCA CGAGGTCGTG 
GTCAACACCA TCGGTGCGAC GACGACACGC ACCGGGCTGA GCGTCCACGC CGAGCTCGAC
CCCGGCGCCT ACCCGACCGG GCTGACCGTG CCCGACGAGG TCATGGACGC CCTACCGCTG
ACGGCCCATG ACTGGCACGG CCAGTGGAAC TACACCCTCG TACCGGCGCC ACCCCGCACC
GTCTCGACGC CGGCGTCCCG GTATGTCGAG ACCGGCCAGC CCGACGACCG TGCCCCGGAC
TGGCTGCACC ATCCGACCAT CACCGGCATG AACCCGGGCG AGTTCACCGC CCTGCTCGCC
GCCGCCGAGC AGTACATCCT CGACCACCCA CCGATCAGCC TGCACCACAA GCACGCCCGC
CACCGCGTCC TGCGGCGCGG GCCCCTGTCG CTGTCCGACC GGCTGCTCGT CACCCTGATC
CACCATCGTT GGAAGACCCA GCAGCAGGCC CTCACCCGCC TGCTGGGTTC ACCACGCGGC
GCTGTCGGCG ACGCGATCCA CGAGATGACC CCAGTCCTGG ACGGCCTCGA CCGGAGGATC
CAACCCGCGC CGATCACCGC GCCCACCGTC CAGGACCTCA CCAGCCTGAT CGATCCAAGC
AACATCAAAA ACAGAAGTTA TTAA
 
Protein sequence
MFSRISTNWR GRPLTSHEVV VNTIGATTTR TGLSVHAELD PGAYPTGLTV PDEVMDALPL 
TAHDWHGQWN YTLVPAPPRT VSTPASRYVE TGQPDDRAPD WLHHPTITGM NPGEFTALLA
AAEQYILDHP PISLHHKHAR HRVLRRGPLS LSDRLLVTLI HHRWKTQQQA LTRLLGSPRG
AVGDAIHEMT PVLDGLDRRI QPAPITAPTV QDLTSLIDPS NIKNRSY