Gene Franean1_2919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2919 
Symbol 
ID5671306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3435757 
End bp3436584 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content68% 
IMG OID641241826 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001507246 
Protein GI158314738 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCGC TTCCTTCACC GCGAGTGGAC GACGAGGTCG TCCGGTACGA GGTCGACAAC 
GGCGTGGCTG TGCTCACGCT CAACCGACCT GATCGAATGA ACGCCTGGAC GTTGGAGATG
GAGGACCGTT ACTTCGACCT GCTCCTGGAA GCGGACGCCG ACCCCGAGGT CCGGGCGGTG
GTCGTGACAG GCGCCGGCAA GGCATTCAGC CCCGGAGCCG ACGCCGACGA GCTGGGGGCG
GGCGCCGCCG TCGGCGCACT CGAGTTCGGT CAGCTGCACC GCCGGTCCTC TACCTTGCCC
TTGACCGTCG GTAAGCCCGT CATTGGCGCG ATCAACGGTG CGGTCGCGGG CATCAGCCTC
GTGCAGGTCC TGCAGATGGA TGTCCGTTTC ATCGCTGCTG AGGCCAAGCT GACGTTCGCG
TTCCCGCGGC GGGGACTGGT CGCGGAGTCC TGCGCCGCCT GGCTGCTGCC TCGGCTGATA
GGGACAGCCC GCGCGCTCGA CCTGCTGCTG TCGGGCCGGA CTGTCCTGGC CGACGAGGCG
CTCGAGCTTG GGCTGGCCAA CTGGGTCGTA CCGCGGGACG GGGTGCTCGA GGCCGCGCTG
GGGTACGCGC ACGATCTGGT GAAGCACTGC TCGCCACGTT CCATGGCCAT CATCAAGCAG
CAGGTCTTCC GGGCGTGGGA GATTGACCTG GAAACCGCCC GCATCGAGGT AGCGGCATCA
ATGGCCGCCG CGTTCGCCAG CGATGACTTC AAGGAGGGCG TCCGGTCATT CGTGGACAGG
CGCCCGCCGG CGTTCGCTGG GCTGACGACC GAGGGGCGTC GGGGATGA
 
Protein sequence
MSALPSPRVD DEVVRYEVDN GVAVLTLNRP DRMNAWTLEM EDRYFDLLLE ADADPEVRAV 
VVTGAGKAFS PGADADELGA GAAVGALEFG QLHRRSSTLP LTVGKPVIGA INGAVAGISL
VQVLQMDVRF IAAEAKLTFA FPRRGLVAES CAAWLLPRLI GTARALDLLL SGRTVLADEA
LELGLANWVV PRDGVLEAAL GYAHDLVKHC SPRSMAIIKQ QVFRAWEIDL ETARIEVAAS
MAAAFASDDF KEGVRSFVDR RPPAFAGLTT EGRRG