Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2912 |
Symbol | |
ID | 5671299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3428394 |
End bp | 3429659 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641241819 |
Product | amidohydrolase 2 |
Protein accession | YP_001507239 |
Protein GI | 158314731 |
COG category | [R] General function prediction only |
COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTAG AGGAAATGAT CCTGGTTAGC ATCGACGACC ACGTCATCGA GCCGCCGGAC ATGTACAAGA ACCACGTCCC GGCCAGATGG CGCGACGAGG TTCCGAAGGT CGTGCGGAAC AGGACGGGCA TCGACGAGTG GGTGTTCCAG GGGCAGAAGA CCTCTACCCC GTTCGGGATG GCGGCGACCG TGGGCTGGCC CCGGGAGGAA TGGGGCTTCA ACCCCGGGGC GTTCGCCGAG CTGCGGCCGG GCTGTTTCGA TGTGCGCCAA CGGGTACAGG ACATGAACGC CAACGGCGTC TTGGCCTCGA TGTGCTTCCC GACGATGGCC GGCTTCAACG CTCGCACATT CACCGAAGCG ACCGACAAGG AACTGTCGCT CGTCATGCTC CAAGCCTACA ACGACTGGCA CATCGATGAA TGGTGCGCCA CGTGCCCCGG CCGGTTCATC CCGCTCGGCA TCGTGCCGAT GTGGGATGTC GGCCTGGCCG TTAAAGAAAT AAAGCGGATC GCGAGGAATG GATGCCGCGC CGTCGGCTTC CTGGAGGCGC CCCACTCCCA GGGCTGGCCA AGTTTCCTTT CCGGCCACTG GGACCCGATG CTTCAAGCAC TCGTGGAGGA GAACATGGTC CTCTGCCTGC ACATCGGCGG GGCACGGGAC CTTGTCACGA CCGCACCCGA GGCGCCGGTC GACCACATGG TCATCATCCC CTCTCAGCTC ACCATTCTCA CCGCGCAGGA CCTTCTGTTC GGACCAACAC TGCGACGCTT TCCCACTCTC AAGGTCGCCC TGTCCGAAGG TGGCATCGGC TGGATCCTAT TCTACCTTGA CCGGGTCGAC CGCCACGTCA CCAACCAGAC TTGGATCCAC AACGACTTCG GCGGCAGACT TCCGTCCGAG GTGTTCCGCG AGCACTTCCT GGCCTGCTAC ATCACCGACC CCGCCGGCCT CGAGCTCCGC CACCGGATCG GCCTCGACAC CATCGCCTGG GAGTGCGACT ACCCGCACAC CGACACGACC TGGCCGGAGT CTCCCGAGAC GGCCTGGAAC GAACTGCAGG GAGCCGGCTG CACCGACGAG GAGATCAATG AAATCACCTG GGAGAACGCC AGCATATTCT TTGGCTGGGA CCCATTCACC CATATCCCCC AGGATCAGGC CAGCGTCGGC GCTCTGCGCG CACTCGCCAC AGACGTGGAC CTCACCAGAA TGCCACGCGA GGAGTGGCGC AGGCGTAACG AGGCGGCCGG GATAGGCGCC TTCTGA
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Protein sequence | MQLEEMILVS IDDHVIEPPD MYKNHVPARW RDEVPKVVRN RTGIDEWVFQ GQKTSTPFGM AATVGWPREE WGFNPGAFAE LRPGCFDVRQ RVQDMNANGV LASMCFPTMA GFNARTFTEA TDKELSLVML QAYNDWHIDE WCATCPGRFI PLGIVPMWDV GLAVKEIKRI ARNGCRAVGF LEAPHSQGWP SFLSGHWDPM LQALVEENMV LCLHIGGARD LVTTAPEAPV DHMVIIPSQL TILTAQDLLF GPTLRRFPTL KVALSEGGIG WILFYLDRVD RHVTNQTWIH NDFGGRLPSE VFREHFLACY ITDPAGLELR HRIGLDTIAW ECDYPHTDTT WPESPETAWN ELQGAGCTDE EINEITWENA SIFFGWDPFT HIPQDQASVG ALRALATDVD LTRMPREEWR RRNEAAGIGA F
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