| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2907 |
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| Symbol | |
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| ID | 5671294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3423231 |
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| End bp | 3424532 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641241814 |
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| Product | putative branched-chain amino acid transport system |
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| Protein accession | YP_001507234 |
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| Protein GI | 158314726 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.787747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGACA CAGCACTCCC GCAGGGCAGG TTGACGCGAA GGCGGTCACG ACGGCGGGCA
GTGGGCACCC TCTTAGCCGC ACCGCTGGCC CTGCTCGTCG TCGCCGCCGC ATGCGGGACC
GACGACGGTG GAAACACCCC AGGCGCTGGC GGTGCAACCA CGAACTCCGA CGTGCTCGGC
CCCGTGAACA AGGCGGCCGG CGAGCCCGTC AAGATTGGGA TCATCTCGGA CGGCAAGGCA
CCCGCCTTCG ACAACTCCAT CCAGTTCGAC GTGGCGGACG CCACCGCCGC GTACCTCAAC
GAACACAAGG GAGGCATCGG CGGGCGGCCC ATCGAGCTGG TGAACTGCGA GACCCAGGCC
GACCCTGCAA GGGGCGCCGA CTGCGGGAAC CAGATGGTCG AGCACGACGT CGTCGCGGTC
GCCATCGGCG AGTCGGCGGT CGCCGAGAGC GTGTCGAAGC CGTTGGCCGA CGCGAACATC
CCGGCGATGT TCTTCGGCGC GGGTAGCCCG GCAGTGGTGG GCGACGCCGA ATCGACCTAC
GTCCTGGGCG ACCCGACCTA CGCGGTCCTC CAGCTACCGA TCGGCATCGC AAAAGACCAG
GGCGCGAAGA AGGTGACCGC AATCGTCATC GACGTGCCGG CCGCGCTCCA CACGTCGCGG
GAGGTCGCAC CAGCGGCCAT GGAGAAGGCG GGGCTCGACT ACGAACTCGT CACAGTGCCC
CCCGGCACGG CCGACATGAC ACCGCAGATG CAGAGCGTCG TCGATGGGGA CCCAGGCATC
GTGTTCGTCC TGGGCGGTGA CTCGTTCTGC ATCAGCGCGT TCAACGGACT GAAGGCAGTC
GGGTACGACG GCACGATCAG CGCCATCTCG CAGTGCATCT CCGACGCGAC CCGCAAGGCA
GTACCAGCGG ACGTACTCGA CGGGATGGTA GTCGGCGCCT CGGTGCCTGC CGGCGGGAGC
GATCCCTCCC GCGTCCTGTA CAGCACCGTT CTAGAGACCT ACGGCGGCAA TATCGACACC
AACTCAACCA CCGGCCGGGG CATGTTCGTG GTGTTCGACG GCCTCATAAC TGCGCTCGGA
GGCATAACGG GAGAAATAAC CACGGAGACG GCCAACGCGG CGATTAAGGC TATGCCGGAG
ACGGAACTAC CGGGAGCAGC ACTGTTGCAG TTCCGCTGCA ACGGAAAAGC ATATCCGGAA
ATGCCGGCGG TCTGTGTGCG CGGCGGGTTG TCCACGACTC TCAACAGCGA TGGTCAGCCC
ACAGAGTACA AGGTTATCGG CACCTCTCCG ATCCCAGACT GA
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| Protein sequence | MQDTALPQGR LTRRRSRRRA VGTLLAAPLA LLVVAAACGT DDGGNTPGAG GATTNSDVLG
PVNKAAGEPV KIGIISDGKA PAFDNSIQFD VADATAAYLN EHKGGIGGRP IELVNCETQA
DPARGADCGN QMVEHDVVAV AIGESAVAES VSKPLADANI PAMFFGAGSP AVVGDAESTY
VLGDPTYAVL QLPIGIAKDQ GAKKVTAIVI DVPAALHTSR EVAPAAMEKA GLDYELVTVP
PGTADMTPQM QSVVDGDPGI VFVLGGDSFC ISAFNGLKAV GYDGTISAIS QCISDATRKA
VPADVLDGMV VGASVPAGGS DPSRVLYSTV LETYGGNIDT NSTTGRGMFV VFDGLITALG
GITGEITTET ANAAIKAMPE TELPGAALLQ FRCNGKAYPE MPAVCVRGGL STTLNSDGQP
TEYKVIGTSP IPD
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