| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2898 |
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| Symbol | |
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| ID | 5671285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3413643 |
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| End bp | 3414467 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641241805 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001507225 |
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| Protein GI | 158314717 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.40522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACCG TGTCAGCGGC TAGGCGGCCG ACGGCCCAGG AGGACAGGTC TTACCGACCG
GCCGTCTACC AAGATCTGGC TCATCGGACG GTGGTGGTGA CCGGAGCGGC CCGGGGCATC
GGAGCGGCGT ACGCGCAAGC GCTGCTTGCC AACGGGGCGA GCGTCGTCGC CGGTGACCTG
GACGAGGCCG CCATGGCCGA GACCGCGGCC CGGCTTTCCC CCAGCGCCGA CCAGGGGGCA
GCCATCGTCG CGATGGGGGT CGACGTCCGC GATCCGCAGG CGCACCGGCA GCTCGCGACC
GCTGCGATCG ACAGGTTCGG CCGGCTCGAC GGGTGGATCA ACAACGCTGG CGTCTACCGG
ACCGGTAGCG TTCTCGACTC GTCTACCGCC GAGGTCGGTC TGATGAACGA GGTTCATGTG
CTCGGCGCGA CACTAGGCGT CCAGGCAGCC GCCGTGGCCA TGGGCGACGC CGGGGGCTCG
ATCGTGAACA TGGCATCGAT CGCCGCGTTC GTGGTGCGTC CCAACGGCAG CGCCTACGGC
GCCTCGAAGG CGGCGGTCAA GCACCTGACG GAGTTCCAGG CCGTCGAGCT CGGCCCGCTG
GGCATCCGCG TCAACGCGGT CGCCCCTGGC ATGGTCAAAA CCGACATGAT CTCGTGGGTC
ACCCAGAACC CCGCGCTGCT GGAGGCAAGC CGCGGTTCGA TACCGCTACG TCGCCTCGGC
ACCCCGGGCG AGATCGCCGA CTGTGCGCTC TTCCTCCTCT CCGACGCGTC GCGGTTCATG
ACAGGCCACA CCCTTGTCGT CGACGGGGGC GGCTGGCTGC GCTGA
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| Protein sequence | MSTVSAARRP TAQEDRSYRP AVYQDLAHRT VVVTGAARGI GAAYAQALLA NGASVVAGDL
DEAAMAETAA RLSPSADQGA AIVAMGVDVR DPQAHRQLAT AAIDRFGRLD GWINNAGVYR
TGSVLDSSTA EVGLMNEVHV LGATLGVQAA AVAMGDAGGS IVNMASIAAF VVRPNGSAYG
ASKAAVKHLT EFQAVELGPL GIRVNAVAPG MVKTDMISWV TQNPALLEAS RGSIPLRRLG
TPGEIADCAL FLLSDASRFM TGHTLVVDGG GWLR
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