Gene Franean1_2894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2894 
Symbol 
ID5671281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3408965 
End bp3409828 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content66% 
IMG OID641241801 
Productalpha/beta hydrolase fold 
Protein accessionYP_001507221 
Protein GI158314713 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGG CCAAGGAGTC CGCGTCTCGC GGGACCGAAC TGCCGTCAGG CAGCTATGTG 
CACTATTACG AGGCTGGTGA TCCCGCCGGT CCCCCCGTGG TCCTGCTGCA CGGTTCGGGG
CCCGGTGCGA CCGGCTGGTC GAACTTCTCC GGCAACATCG GCGTGATCGC CGACGCCGGC
TTCTATGTCC TCGCCCCGGA CATGCCTGGC TGGGGCGACT CGGCGGCGGT GGCTACCAAG
GAGATGGACC ATGACGCCGA CCTCGTCGGC TTCCTCGACG TTCTCGGACT GGAGAAGGTC
GCGCTCGTCG GCAACTCCAT GGGTGCCCAC ACCGCGATAC GCTTCGCGAC ACTCCACCCC
GGGCAGATCA CCCACCTGGT CACCATGGGC GCCAGTCTCG GCAAAGGCCT CCCCGCGGGT
CTGTTCGGCC CACAGGACGG GCCGAGCGAG GGGCTCAAGG TGCTCGTCAA GGCTTACCGG
GACCCGAGTC CGGAGAACAT GAAGGCCCTC GTCGAGATCA TGACCTTCGA CAAGGCCCGC
TTCGCCACGC CCGCGCTGAC GAAGGCCCGC TCGGAGGCGG CCGCGGCCCG ACCCGACCAC
TTGCGGAACT ATGTCGAGGG ACTCGCGGAC GGTGCGCCGA TCCCCTTCAA GGTCGATCGT
TCGCTCATCC CGAGCATCGC GGTGCCGACC CTCCTCATCC ACGGCCGTGA CGACCGCGTC
CTGCACTTTG AGACGTCGCT GTGGCTGTGC GCAAACATCA GGAACTCCCG TCTCGTGCTC
CTCAACCAGT GCGGCCACTG GGCGATGATC GAGCACGCCG ACGAGTTCAA CCATCTGGTC
ATCAACTTCC TGACCCACAA CTGA
 
Protein sequence
MSLAKESASR GTELPSGSYV HYYEAGDPAG PPVVLLHGSG PGATGWSNFS GNIGVIADAG 
FYVLAPDMPG WGDSAAVATK EMDHDADLVG FLDVLGLEKV ALVGNSMGAH TAIRFATLHP
GQITHLVTMG ASLGKGLPAG LFGPQDGPSE GLKVLVKAYR DPSPENMKAL VEIMTFDKAR
FATPALTKAR SEAAAARPDH LRNYVEGLAD GAPIPFKVDR SLIPSIAVPT LLIHGRDDRV
LHFETSLWLC ANIRNSRLVL LNQCGHWAMI EHADEFNHLV INFLTHN