Gene Franean1_2883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2883 
Symbol 
ID5671270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3398701 
End bp3399675 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content70% 
IMG OID641241790 
Productacetaldehyde dehydrogenase 
Protein accessionYP_001507210 
Protein GI158314702 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4569] Acetaldehyde dehydrogenase (acetylating) 
TIGRFAM ID[TIGR03215] acetaldehyde dehydrogenase (acetylating) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCACCG CCACCAGCGG AACCGGAAAG ACGAAGGTCG CCGTCATCGG CTCGGGGAAT 
ATCGGCACCG ACCTGATGAT CAAGATCCTC CGGACCTCCG AGGTTCTGGA AATCGCCGCG
ATGGTCGGCA TCGACGCCGA ATCCGACGGG CTGGCCCGCG CCCGCCGGCT CAAGGTCGCG
ACCACCCATG AGGGCATCGA CGGGTTGCTG CGGATGCCGG AGTTCGACGA CATCGAGATC
GTCTTCGACG CCACGTCCGC CGGCGCGCAC GCCCGCAACG ACGAGCTGCT GCGTGCCCGC
GGCCGCCGGG TCATCGATCT GACCCCGGCC GCGATCGGGC CGTACGTGGT GCCGCCGGTC
AACCTGGACG CCCACCTGGA CGCCCCCAAC ATCAACATGG TGACCTGCGG CGGGCAGGCG
ACGATCCCGA TCGTCGCGGC CGTCAACGCC GTCACCCCGG TGGCCTACGC CGAGATCGTC
GCGTCCATCG CGTCGAAGTC GGCAGGGCCG GGCACCCGGG CGAACATCGA CGAGTTCACT
GAGACCACGG CCAGCGCCAT CGAGAAGGTC GGCGGTGCCG CCCGCGGCAA GGCCATCATC
GTGCTGAACC CGGCCGAGCC GCCGCTGGTC ATGCGCGACA CCGTGTACTG CCTGATCGGC
GCCTCCGACC AGGCCACCCA GGACGCCGTC GTCGCCTCGG TGACCCGGAT GGTCGACCGG
GTGCGCGAGT ACGTCCCGGG CTACAGGCTC AAGCAGCAGG TGCAGATCGA GGAGGCGTCG
GCGGACGATC CACTGCGCCA GCTCGCGCCG GACGGGTCCG AACCCGCCAA GGTCACGGTG
TTCCTGGAGG TCACCGGTGC CGCGCACTAC CTGCCCGCCT ATGCCGGCAA CCTCGACATC
ATGACCTCGG CCGCGCTGCG TGCCGGGGAG CGCCTGGCAC AGACCCTCAC CCAGCGGGAA
GGAGCGACCG CCTGA
 
Protein sequence
MATATSGTGK TKVAVIGSGN IGTDLMIKIL RTSEVLEIAA MVGIDAESDG LARARRLKVA 
TTHEGIDGLL RMPEFDDIEI VFDATSAGAH ARNDELLRAR GRRVIDLTPA AIGPYVVPPV
NLDAHLDAPN INMVTCGGQA TIPIVAAVNA VTPVAYAEIV ASIASKSAGP GTRANIDEFT
ETTASAIEKV GGAARGKAII VLNPAEPPLV MRDTVYCLIG ASDQATQDAV VASVTRMVDR
VREYVPGYRL KQQVQIEEAS ADDPLRQLAP DGSEPAKVTV FLEVTGAAHY LPAYAGNLDI
MTSAALRAGE RLAQTLTQRE GATA