Gene Franean1_2875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2875 
Symbol 
ID5671264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3389288 
End bp3389656 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content63% 
IMG OID641241784 
Producthypothetical protein 
Protein accessionYP_001507204 
Protein GI158314696 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.302821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTCGG CGGGCAGTTC GACCGGGTCA CCGAAGCCCT CTCCGAGAAA CTCCCGAAGG 
CCGCCGACCA TCTCTCCGGC GCAAAAGCCG ACCTACTCGC GTTCACGACC TACCCGCGGG
AGGTCTGGCG GCAGATCCCC GCAGGAACGA CTGAACAAGG AAATCCGCCG CCGTACCGAC
GTCGTCGGTA TCTTCCCCGA CCGTGACGCC ATCATACGTC TCGTCGGCGC GGTCCTCGCG
GAACAACACG ACGAGTGGAT CGAGACCCAC CGCTACTTCG GCCTCGAAAT CCTCGCGAAA
GTCGACGCCA CGAACAAGAA ATCCGACACA CCTGAGATCG GCGTGACACC CGAAGCTCTG
ACCGCATAA
 
Protein sequence
MRSAGSSTGS PKPSPRNSRR PPTISPAQKP TYSRSRPTRG RSGGRSPQER LNKEIRRRTD 
VVGIFPDRDA IIRLVGAVLA EQHDEWIETH RYFGLEILAK VDATNKKSDT PEIGVTPEAL
TA