| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2874 |
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| Symbol | |
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| ID | 5671263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3388572 |
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| End bp | 3389213 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641241783 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001507203 |
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| Protein GI | 158314695 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3316] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.30961 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGTCC TCGCTGTCCG CTGGTACCTG CGGTTCGCGC TGTCGTACCG GGACGTCGAG
GAGCTCCTCG CCGAACGCGG CCTCGAGGTT GATCACGTCA CGGTGTACCG GTGGGTGCAG
CGCTTCACGC CCCTGCTGGT CGAGGCGGCC CGGCCGTGTC GTCACCGGCC TGGGGATAGG
TGGTTCGTCG ACGAGACCTA CGTCAAGGTC TCCGGCCGGT GGACGTACCT GTACCGGGCG
GTCGACCAGC ATGGCCAGGT CATCGACGTC CTGGCCAGCG AACGACGCGA CCAGGCCGCC
GCTCGGCGCT TCTTCATTCG GGCGCTGACG CAGGGGCGAC GGCCGGTCGA GGTCACGACC
GACAAGGCGT CGGTCTACCC GCGGATCCTC GACGAGCTGC TCCCCGATGC CTGCCACGTC
GACGCCGCTC GGGAGAACAA TCGTGTTGAA GCCGACCACG GCCGGTTGAA AGCGTGGCTG
CGGCCGATGC GTGGGCTGAA ACGCCTGCGG TCCGTCCAGA CCGTCAGCGC CGGACACGCT
CTGATCCAGA ACATCCGCCG CGGCCACTAC GAACTCGGGA CCGACAGCAG TCCGCACCTG
CGGCTGGAAG CCGCGTTCAC CGAACTCGCC GCAGCCGTCT GA
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| Protein sequence | MIVLAVRWYL RFALSYRDVE ELLAERGLEV DHVTVYRWVQ RFTPLLVEAA RPCRHRPGDR
WFVDETYVKV SGRWTYLYRA VDQHGQVIDV LASERRDQAA ARRFFIRALT QGRRPVEVTT
DKASVYPRIL DELLPDACHV DAARENNRVE ADHGRLKAWL RPMRGLKRLR SVQTVSAGHA
LIQNIRRGHY ELGTDSSPHL RLEAAFTELA AAV
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