Gene Franean1_2865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2865 
Symbol 
ID5671254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3380711 
End bp3381151 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content68% 
IMG OID641241774 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001507194 
Protein GI158314686 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.17139 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGGCC CATCCACTCG TCGACCCCGG CCGGGGACCC CCGGCCGGGT CCTCGCCTGG 
CTGCCCGACG GCAGACCTGC CGACGTCTAC AGCGCCCCCT GCCCGTCACG GCAGGTCCTG
GACCGCATCG CCGACAAATG GACCGCTCTC ATCATCGGCT CACTGTCCAC CGGCACCAAG
CGCTACAGCG AACTGCGAAT AGCGATCGAG GGAATCAGCG AGAAGATGCT CACCCAGACC
CTGCGCAGCC TCGAACGCGA CGGCCTGGTC ACGCGTACCA CGCATCCGAC CATCCCCCCC
AAGGTCGAGT ACAGCCTCAC CCCGCTGGGG ACCACCCTGA CAGCCCCGCT GGCAGCCATC
CGCGACTGGG CCGAACAGCA CATCAACGAA GTCAACGACG CCCGCATGCA CAACGACCAG
CAGACCCGGC ACACGGGCTG A
 
Protein sequence
MRGPSTRRPR PGTPGRVLAW LPDGRPADVY SAPCPSRQVL DRIADKWTAL IIGSLSTGTK 
RYSELRIAIE GISEKMLTQT LRSLERDGLV TRTTHPTIPP KVEYSLTPLG TTLTAPLAAI
RDWAEQHINE VNDARMHNDQ QTRHTG