Gene Franean1_2861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2861 
Symbol 
ID5671250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3375846 
End bp3376751 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content68% 
IMG OID641241770 
Productalpha/beta hydrolase domain-containing protein 
Protein accessionYP_001507190 
Protein GI158314682 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTCG ACCCCGCCGC CCTTCGATTT CTCGAGGCGG TCCGCGACAT TCCGCAACCC 
TACGAAATGG CTCTCGCCGA ATTTCGGCGC GCGGGCGAGG ACCTGGTCAG AACTTCGGAA
CCGGAGCCGA TCACGAAGGT TGACGAGTTC ATCATCCCGG GCGGCGATGG CCAGGAACTC
AGGCTGCGCT GCTACGTTCC CGCGCACGAG GGTCCGCGCC CGGTGGTCGT CTGGCTGCAT
GGGGGCTCCT TCATCCGGGG ATCGCTCGAC ATGTTCGACG CGATTCGCCG ATCCTTCGCG
AACGGGACCG GCTGCATCGT GCTCGCGGTG GACCAGCGGC TGTCGCCGGA AGCACAGTTC
CCGGCACCGC TGGAGGATGC CTACGCCGCC ATCCGGTGGG CCGCGGACAA CGCGGACAGC
CTCGGCGGAG ATCCGAACCG GCTTGGCGTC GGCGGTGAGA GCAGCGGCGG AAACCTGGCC
ACGGCCGTCA CGCTTCTCGC CCGGAAGCGG GGGGCGCCCC GGCTGGCCTT CCAGGTGCTG
GTAACGCCGT TGGTCGACGC CACGGTCGGA AGCGTCTCGG CGCGGGAGTA CGGGGAAGGT
TACGTGCTGA CCCGGCAACA GCTCATTTGG GCCTACGAGC AGTACGCGCC TGGTGTGAGC
CGCGTCGATC CGCTGCTGTC TCCCCTGCAC GAGCCGCGTC TCGATGGGCT TCCGCCGGCC
GTCGTCCTCA CCGTCGAATA TGACCCGGTG CGTGACGAGG GTGAGCTGTA TGCGCGGCGC
CTGGCGGCGG AAGGTGTGCC GGTGTCCAGT GCTCGGATCG ACGGGTTTCT GCATCACTTT
CCCGGTTCGC AGGCCGTCCC GACGTTGGTT CGGCTCACGT GTGGCCTGCT CGAGTTGCTG
GAGTAA
 
Protein sequence
MALDPAALRF LEAVRDIPQP YEMALAEFRR AGEDLVRTSE PEPITKVDEF IIPGGDGQEL 
RLRCYVPAHE GPRPVVVWLH GGSFIRGSLD MFDAIRRSFA NGTGCIVLAV DQRLSPEAQF
PAPLEDAYAA IRWAADNADS LGGDPNRLGV GGESSGGNLA TAVTLLARKR GAPRLAFQVL
VTPLVDATVG SVSAREYGEG YVLTRQQLIW AYEQYAPGVS RVDPLLSPLH EPRLDGLPPA
VVLTVEYDPV RDEGELYARR LAAEGVPVSS ARIDGFLHHF PGSQAVPTLV RLTCGLLELL
E