| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2854 |
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| Symbol | |
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| ID | 5671243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3368763 |
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| End bp | 3370379 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641241763 |
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| Product | transposase |
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| Protein accession | YP_001507183 |
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| Protein GI | 158314675 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5421] Transposase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGTCG CGATGGACTA CGGGCCGCCG AGCGTCGAGA AGCCGCTCGG CGCGCTCCCT
GTCGTGCGTG ACTACCTGGC CCGCCTCGAT GTCGCGGGCA CGATCGATCG ACTCGCCCCG
ATGCGTGACA AGGTCAACCG GGCCACCCAC GGCGACGTGA TCGCCGCACT GGTCGCGAAC
CGGCTGACCT CGCCGACCCC GCTGCTGCAC GTCGAACGGT GGGCACGGGA CTGGGCGGTC
GAAGAGATGT TCGGTATCGC GCCGGACGTG TTGAACGACG ACCGGGTCGG TCGGGCGCTT
GACGCGCTCG CCCCGGTCTG CGAGGCCGTG GTCGGTTCGG TCGGTGCCGC GGCGATCGCC
GCGTTCGACC TCGACCTGTC CCGTGTCCAC TGGGACATGA CATCGATCTC GCTGCACGGC
GCCTATCCCG AGATCGACGG CGACTACGCG ACCCCGAAGT ACGGCCACCC GAAGGACCGC
CGCCCCGACC TCAAACAGGT CCAGACCGGG CTCGCGGTCA CCGGTGACGG CGGGATCCCG
CTGCTGCACC GCGCCTACGA CGGCGGCGCC GGTGAGGTCT GTCAGGTCAC CGGCGCGATG
CGGGCCCTGG CCGGGCTCGC CGGCCCCCGA CAGTTCCTGC TGGTCGGCGA CAGCAAACTC
GTCTCCTACG CGAATCTGAC CGCGTTGACG TCCACGCCCG GGGTCACGTT CCTCGCCCCG
GCACCGAAAA CCGTCGTGCC CGGCCAGGTC CTGGCCGCCC AGGACTGGGC CACCGCCACA
CTCGTCGGCT ATGTCGCGGC CCGTGACCAG GACAAACCCT TCCACCAGCG GGCGGCCTAC
CGTGTCCGGG AAGGCGTCAC CACCCTGCGG GGACCCCGGA AGAAAGACCC GCCGGTCACC
GTGCGCACGG TGTTCGTCTG GTCGTCGGCG AACGACCAGG CCGCGAAAGC CGCCCGCGCG
CTGAAACTCG GCCGCGCCCG CACCGACCTC GACACCCTCA CCCGCGCCGC GGGCAGCCAC
CACCTCTACC GCACCGAGGC CGCGGTGCAG GCCCGCCTGA CCCTCCTGGC GACGAAACAC
CGCGTCACCC GCTACCTCCA CGCCACCACC AGCGTCGACC CGGACACCGG GAAACCGGCC
CTGGCCTGGA ACTTCGACTC CGCCGCGCTC GACGCCGAGG CTGCCACCGA CGGCTGGTAC
GCGCTGCTGA CCAACCTGCC TGACGACGTC GGCCCGGCTG AGGTCCTCGC CCGCTACAAA
GGGCAGGAAG TCGTTGAACG TCGCTACGGC GCGTTCAAGG GCCCGCTCGC GGTCGCCCCG
ATGTTCCTGC ACTCCAACCA GCGGATCCAC GCCCTCATCC ACGTGATCTG CCTGGCCCTG
CTCGTCTTCT GCCTGGTCGA ACGCCAAGCC CGGCTCGGTA CCGGCCCTGA CGGGAAGATC
CCCGGCATCT ACGCCGGTCG TCCCGCCCGC CCCACCGGAG CACTGGTCCT CGGCGCACTG
AGCAGGCTGC GCCTCGTGCC CGCCCGCGGC GACCAGCCTG CCTACATCCC CCGCCCATCG
GCGCTGCACC AGCACCTCCT CGACATTCTC GGCGTCGATC CCACCCGGCC ACCTTGA
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| Protein sequence | MTVAMDYGPP SVEKPLGALP VVRDYLARLD VAGTIDRLAP MRDKVNRATH GDVIAALVAN
RLTSPTPLLH VERWARDWAV EEMFGIAPDV LNDDRVGRAL DALAPVCEAV VGSVGAAAIA
AFDLDLSRVH WDMTSISLHG AYPEIDGDYA TPKYGHPKDR RPDLKQVQTG LAVTGDGGIP
LLHRAYDGGA GEVCQVTGAM RALAGLAGPR QFLLVGDSKL VSYANLTALT STPGVTFLAP
APKTVVPGQV LAAQDWATAT LVGYVAARDQ DKPFHQRAAY RVREGVTTLR GPRKKDPPVT
VRTVFVWSSA NDQAAKAARA LKLGRARTDL DTLTRAAGSH HLYRTEAAVQ ARLTLLATKH
RVTRYLHATT SVDPDTGKPA LAWNFDSAAL DAEAATDGWY ALLTNLPDDV GPAEVLARYK
GQEVVERRYG AFKGPLAVAP MFLHSNQRIH ALIHVICLAL LVFCLVERQA RLGTGPDGKI
PGIYAGRPAR PTGALVLGAL SRLRLVPARG DQPAYIPRPS ALHQHLLDIL GVDPTRPP
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