Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2851 |
Symbol | |
ID | 5671240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3366176 |
End bp | 3366889 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641241760 |
Product | putative transposase |
Protein accession | YP_001507180 |
Protein GI | 158314672 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.878699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGTC GACGTCGTGT CCGTCCACCG GTTCCGACGT CGGAGTTCGC CGGGTTCCGC TTCCCTCCCG AGGTGATCGT CCTGGCGGTG CGGTGGTACC TGCGCTACGC CTTGTCCTAC CGGGATGTGG AGGAGCTGCT TGCCGAACGC GGCCTCGAGG TTGATCACGT CACGGTCTAC CGGTGGGTGC GCCGGTTCAC CCCGCTGCTG ATCGACGCGG CCCGGCCATG CTGGCACACA CCGGGTGATC GTTGGTTCGT CGACGAAACG TATGTGAAGG TCGCCGGACG ATGGACCTAT CTGTACCGGA CCGTCGACCA GTTCGGCCAG GTCATCGATG TGCTGGCCTC CGAGAAGCGG GATCTCGCCG CGGCCCGCCG GTTCTTTACC CGCGCCCTGT CCCACGGCCG GCGGCCCGTC GAGGTGACCA CCGACCGGGC CGCCTCCTAC CCACGAGTCC TCGACGAACA GCTCCCCGCC GCTCATCACG TCGACGACCA GTACGCGAAC AATCCGATCG AGGCCGACCA CGGCCGGTTC AAGGCACGAC TACGGCCGAT GCGCGGCCTG AAAGGCCTCC TCTCCGCACA GATCATCGGC TCCGGGCACG CGTTCGTGCA GAACATCCGC CGCGGCCACT ACGAACTGGG CGTCGATGCC GACCTCCGGA ACCGGCTGAC GGCTGCCTTC ACCGAGCTCA CCCTGGCCAT CTGA
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Protein sequence | MMRRRRVRPP VPTSEFAGFR FPPEVIVLAV RWYLRYALSY RDVEELLAER GLEVDHVTVY RWVRRFTPLL IDAARPCWHT PGDRWFVDET YVKVAGRWTY LYRTVDQFGQ VIDVLASEKR DLAAARRFFT RALSHGRRPV EVTTDRAASY PRVLDEQLPA AHHVDDQYAN NPIEADHGRF KARLRPMRGL KGLLSAQIIG SGHAFVQNIR RGHYELGVDA DLRNRLTAAF TELTLAI
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