| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2834 |
|---|
| Symbol | |
|---|
| ID | 5671223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 3351051 |
|---|
| End bp | 3351944 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641241743 |
|---|
| Product | xylose isomerase domain-containing protein |
|---|
| Protein accession | YP_001507163 |
|---|
| Protein GI | 158314655 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.376548 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTCG GTATCAATCT GTGCTTCGCC GTCAAACGCG ACCTGGAACC GCAGCGGTGG
GCCGAGTTCG TCCGCGCCGA CCTGGGACTG GACACGGTGC AGGTCACCTT CGACCTGCTC
GACCCGTGGT GGCCGGAGCG GGAACGTGAC CAGGTCGCCC GCCGCATCGC CGACGCCGCC
GCCGCGTGGG ATCTCACCAT CCACAGCGCC TACGTCGGCC TGGCGCACTA CCTGCCCGCC
GGGCTGCTCG ATCCCGACCC GCAGGCGCGG GCGGTCGCGC TGACCTGGTG GCGGCGGGCC
TGCGATGTGA CCGCGCTGCT CGGCGCCGGT GCCGTCGGGG GGCCGCTGGG CACCTTGAGC
GTCCAGGACG CCGCCGACCC CGACAGCCGG GCACGACGCT ACGCCGATCT ACTCGACTCG
CTGGTGTTCG TCGCCGACCA CGCCGCGGCT GTCGATCTCG CCGAGTTCCT CGTCGAACCG
ACGCCGATCG CCCGCGAGAT CCCGGCCACG GTCGACCAGG CCGACCAGCT GATACGCGAC
CTGGGTGGAC GTACCGAGGT GCCGGTCGGC CTGACACTCG ACATCGGTCA CACCCTCTAC
CAGCCGCTGT ACGGCCCGGA CAGCACACCG GCGGACTGGA TCAGCCCGCT GGGCTCGGCG
ATCCGGCTGG TGCACCTCGA CAACACCGAC GGCCTGGGCG ACCCGCACTG GGGCTGGCCC
CACCCGCAGG GACGTGTGGA CGTCGCCCAG GTCGGCGCGG CGCTGCGGGA CGCCGGACTG
GACGACGTAC CGGTGCTCCT GGAGGTCTAC CCGCGGTTCG AGGACGACGA CGACCAGGTC
CGCCGGACGA TCGCCAGCTC GGTCGCCCAC TGCAAAGAAC AGCTCGCCCG ATGA
|
|---|
| Protein sequence | MNLGINLCFA VKRDLEPQRW AEFVRADLGL DTVQVTFDLL DPWWPERERD QVARRIADAA
AAWDLTIHSA YVGLAHYLPA GLLDPDPQAR AVALTWWRRA CDVTALLGAG AVGGPLGTLS
VQDAADPDSR ARRYADLLDS LVFVADHAAA VDLAEFLVEP TPIAREIPAT VDQADQLIRD
LGGRTEVPVG LTLDIGHTLY QPLYGPDSTP ADWISPLGSA IRLVHLDNTD GLGDPHWGWP
HPQGRVDVAQ VGAALRDAGL DDVPVLLEVY PRFEDDDDQV RRTIASSVAH CKEQLAR
|
|---|
| |