| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2830 |
|---|
| Symbol | |
|---|
| ID | 5671219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 3347551 |
|---|
| End bp | 3348669 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641241739 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001507159 |
|---|
| Protein GI | 158314651 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCACA ATCCTGCCGC CGGCGGCCCG CGGCCTCGCC ACGTCACCTG CTTCCGCCTC
GCCGACGCCT CGGTCACCCT CACCACGACC GTGACCGCCG CAGTACGCGC CGCCCAGGAC
ACCCTCTACG CCTACCGGAC TACCACCGAC CCGCACGCCG CGTGGCACGT CACCATCACC
GTCGCCGACC CCCGCCACAG CCTCCTCGAT GCCCCGCCCG ATGTCGGCGA CATCCGCGAG
ATCGGCCCCA GCGAGCTCAC CGCCCGCCAC ATCACCGAGG ACGAACGTGA GGTCTTCTGG
ATCGACCGGC ACCGCACCCT CGTCGTCCAC GACCCCACCC GACGCGCGAC CACCGTCCAC
TGCGCCACCG ACGACGCGGC GACCTACTAC GCCGCCCGCC TCGTCCGCCA ACTCATAACC
GCCCAGCTCC TCGCCGCCGG CGCGGTTTAC ACCCACACCG CCGCACTCGT CCACCGCGAC
CACGGCATCC TGATCGCCGG CCATCCCGGC GCCGGCAAGA CCACCACCCT CGTGGCCGTC
CTGCGCCAGC TCGGCGGAGA GTTCGTCACC AGCGACCGGC TCCTGCTCAC CCCCGACAGA
AACGGCGGAC TGCTCGGCTA CGCCTGGCCC GCCCACATCC GCGTCGGCGT CGGCACCCTG
CTCGCCTACC CCGACCTCAC CGGCCTCGTC CCCATCGGCC GACGCACGGA CCCGGCCGAC
CTGCACACGA AACTCAGCAT CGAGCCCCCC GACATCTCAC GCCTGTTGCA CGCGGGCACG
CTCACCGCCT CCTGCCGCCC CCACGTGATG ATCTGGCCGC AGCTGTCCCC GATCGCAGGA
AACGCCCGCC ATCAGCGCAT CCCCGCCGGG ACCGTCCACG CCACGCTGAC CGACAACCAG
CTGTTCATGC ACCGCCCCAC CTCGGGCGCC AGCTCCCACA TCAACCACTG GCTCGCCCCG
ACACCCCCGG CCCACACGAC GGAGAGCAAC AGGCGCGCTG TCATCGCCGC CCTCGCCCGG
ACCGTGCCCT GCTACGCGCT GGTGGGCCGC CCGGACCCCA CCACGGTCGC CGACGCCGTC
ACCGCCATCC TCCACGACAC CGAAACAGCC ACCCGATGA
|
|---|
| Protein sequence | MTHNPAAGGP RPRHVTCFRL ADASVTLTTT VTAAVRAAQD TLYAYRTTTD PHAAWHVTIT
VADPRHSLLD APPDVGDIRE IGPSELTARH ITEDEREVFW IDRHRTLVVH DPTRRATTVH
CATDDAATYY AARLVRQLIT AQLLAAGAVY THTAALVHRD HGILIAGHPG AGKTTTLVAV
LRQLGGEFVT SDRLLLTPDR NGGLLGYAWP AHIRVGVGTL LAYPDLTGLV PIGRRTDPAD
LHTKLSIEPP DISRLLHAGT LTASCRPHVM IWPQLSPIAG NARHQRIPAG TVHATLTDNQ
LFMHRPTSGA SSHINHWLAP TPPAHTTESN RRAVIAALAR TVPCYALVGR PDPTTVADAV
TAILHDTETA TR
|
|---|
| |