Gene Franean1_2821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2821 
Symbol 
ID5671210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3339452 
End bp3340585 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content56% 
IMG OID641241730 
ProductS-adenosyl-L-homocysteine hydrolase 
Protein accessionYP_001507150 
Protein GI158314642 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0499] S-adenosylhomocysteine hydrolase 
TIGRFAM ID[TIGR00936] adenosylhomocysteinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0417356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTCGACC TTGAGGAAGG TAGCAGGCGC GATTTCCTAT GGGATGTTCT GGCTCTTTTC 
GGCGAGGGCG GCGGAACACG GATCCTAGTC ATTACTCACT GCCTGACAGA CAGGCCCGTC
TTTCTTCAGA CTCTTAACAA GAGTTATCCG ATCAGTCAGA TACACCCGAT TCCCTACTCG
GAGAACCAAG CCATCGTCCG CCAGCTTGAA AAGGATTTTC GGGTCACACG CCTGTCTCTT
GCACAGTTAC TCGACGCCAA GTCGTTGCTC GATCGGACGA GTGAATTGAT AGAAGAGGAA
TCGACCCCCC TAGCGATCGT CGAGATAGGA GGATATCACG CGAGCCTCGT GGGAACTCTG
AAGGAGCGTC ATGGCAAAAA GTTTATGGGC TGCGTGGAGT CCACCGAACA TGGTCATCGG
GCCTACGAGC GACAGGAAGC GCTGAGCGTC CCCGTTGTCT CTGTTGCCAG GAGCAGGTTG
AAAGACCTTG AGTCACAGCT GATAGGGCCG TCAGTCGCCT TTTCTGTCGA GAAGCTCGTG
AGGGCAATGG GAGTACCATT GTTCGGGCTG AACGCAGGAA TTCTTGGGTA CGGACGGGTT
GGCCGCAACC TCGCATATAG TCTCGCGGGG AGAGGTTCCA GCGTCTCCGT ATATGACAGC
GATCCCCTGA GACGGATATC CGCTGCTGCC GACGGCTTTC AAAGCGTTTC ACGGGAGAGC
GTCGTACAGA CGTCCGATAT CATCGTCGGA GCTACCGGAA ACACTTCTCT TGTTGAAATG
GACTTTCCGC AGCTGAAACA TCGCGTGATC CTAGCAAGCG CGACGTCCAA ACGAGCCGAG
TTCGCTCTGG AGGCCCTACT GGCCACGGCA GATCATATTC GGCGGGTGAA CGACGGTGTC
GACGAAATCA CCATGCCCGA CGGACGGCGG ATCTACGTCC TCACCGATGG AGAGCCGGTG
AATTTCGCAG ACGGCGCGGT GGTCGGGCCA GTTATGAGTC TTGTTCACGC AGAGATCATA
GCTGCCCTTT CGATGCTCTG GAGATCACGG GACAGTAAGG GCATCCACAA TGTCGAGCCG
GCTGACCAGG AAAAGATCTG CCATCTTTGG GTAGAAAGGT TCCTGAACAG CTAG
 
Protein sequence
MFDLEEGSRR DFLWDVLALF GEGGGTRILV ITHCLTDRPV FLQTLNKSYP ISQIHPIPYS 
ENQAIVRQLE KDFRVTRLSL AQLLDAKSLL DRTSELIEEE STPLAIVEIG GYHASLVGTL
KERHGKKFMG CVESTEHGHR AYERQEALSV PVVSVARSRL KDLESQLIGP SVAFSVEKLV
RAMGVPLFGL NAGILGYGRV GRNLAYSLAG RGSSVSVYDS DPLRRISAAA DGFQSVSRES
VVQTSDIIVG ATGNTSLVEM DFPQLKHRVI LASATSKRAE FALEALLATA DHIRRVNDGV
DEITMPDGRR IYVLTDGEPV NFADGAVVGP VMSLVHAEII AALSMLWRSR DSKGIHNVEP
ADQEKICHLW VERFLNS