Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2820 |
Symbol | |
ID | 5671209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3338560 |
End bp | 3339399 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641241729 |
Product | methyltransferase type 11 |
Protein accession | YP_001507149 |
Protein GI | 158314641 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.219288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCGCTC GCAGGGACCG CCAATTTCCA TCTGAAGGAC GCGGAGGTAT ATGGATGGCC CCAACCCGTG TTCCCCCGAA TCACGTCCCT GCGCCACATG GGTCGTTCGA GCGGCTCGCT GACCGATATG ATCAGACACG GGGAGGCGAA CGGCGCGGAG CATTGATTGC GGCGAGCCTC GCGCCGTTCC TCCCCACGAA CACTCCGGTC CTGGACATCG GAGTGGGCAC CGGCGTCGTC GCCAAGGCGC TTGCCGCTCA AGAAGTCTAT GTCATCGGAG TCGATCTCTC GGCTGCCATG CTGGCGCGGG CGACCCTACG TATCGGTCCC CGTGTAGCCG TGGGTGACGC GGCGAACCTG CCGTTTGCTG ATGCGTCGAT TGGAGGCGCG TATGCGGCCT GGGTGTTCCA GCTAGTCGAT GACGTAGCCC GGGTGCTCAG CGAAACGGCA CGCATACTCC GTCCGGGCGC ACCGTTCGCC TGGATTCCAG CTCGTTGGTT GCCTTCGGGT AACGACGTAA GGGACGTTCT CGACAACCTG TATTCTGAAC TCGGCTGGAA TGACCAAGAA AGTCCTCCAT ATGTCGTTCA GCAGGCGTCT TCCGTGGGTC TCAGTCTGAT TTCCACGACA ACACTGTTGG ATACCACACG TCCAATAACT CCAGCACAGG CGGTCCAGCA GATTCACGAC CGAGCGATGA GCTGCCTGTG GGATCTTAAT CCTGAACGCT GGCTCCGCCA TGTGGAGCCG ACGATCCGTC GTCTAAAATC CCTTCCGGGC AGCGATGAGC CTCGCGAAAC AGCTGATATT TACCAAATGT ACCTCTTCCG ACGCGACTAG
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Protein sequence | MGARRDRQFP SEGRGGIWMA PTRVPPNHVP APHGSFERLA DRYDQTRGGE RRGALIAASL APFLPTNTPV LDIGVGTGVV AKALAAQEVY VIGVDLSAAM LARATLRIGP RVAVGDAANL PFADASIGGA YAAWVFQLVD DVARVLSETA RILRPGAPFA WIPARWLPSG NDVRDVLDNL YSELGWNDQE SPPYVVQQAS SVGLSLISTT TLLDTTRPIT PAQAVQQIHD RAMSCLWDLN PERWLRHVEP TIRRLKSLPG SDEPRETADI YQMYLFRRD
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