Gene Franean1_2820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2820 
Symbol 
ID5671209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3338560 
End bp3339399 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content60% 
IMG OID641241729 
Productmethyltransferase type 11 
Protein accessionYP_001507149 
Protein GI158314641 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.219288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGCTC GCAGGGACCG CCAATTTCCA TCTGAAGGAC GCGGAGGTAT ATGGATGGCC 
CCAACCCGTG TTCCCCCGAA TCACGTCCCT GCGCCACATG GGTCGTTCGA GCGGCTCGCT
GACCGATATG ATCAGACACG GGGAGGCGAA CGGCGCGGAG CATTGATTGC GGCGAGCCTC
GCGCCGTTCC TCCCCACGAA CACTCCGGTC CTGGACATCG GAGTGGGCAC CGGCGTCGTC
GCCAAGGCGC TTGCCGCTCA AGAAGTCTAT GTCATCGGAG TCGATCTCTC GGCTGCCATG
CTGGCGCGGG CGACCCTACG TATCGGTCCC CGTGTAGCCG TGGGTGACGC GGCGAACCTG
CCGTTTGCTG ATGCGTCGAT TGGAGGCGCG TATGCGGCCT GGGTGTTCCA GCTAGTCGAT
GACGTAGCCC GGGTGCTCAG CGAAACGGCA CGCATACTCC GTCCGGGCGC ACCGTTCGCC
TGGATTCCAG CTCGTTGGTT GCCTTCGGGT AACGACGTAA GGGACGTTCT CGACAACCTG
TATTCTGAAC TCGGCTGGAA TGACCAAGAA AGTCCTCCAT ATGTCGTTCA GCAGGCGTCT
TCCGTGGGTC TCAGTCTGAT TTCCACGACA ACACTGTTGG ATACCACACG TCCAATAACT
CCAGCACAGG CGGTCCAGCA GATTCACGAC CGAGCGATGA GCTGCCTGTG GGATCTTAAT
CCTGAACGCT GGCTCCGCCA TGTGGAGCCG ACGATCCGTC GTCTAAAATC CCTTCCGGGC
AGCGATGAGC CTCGCGAAAC AGCTGATATT TACCAAATGT ACCTCTTCCG ACGCGACTAG
 
Protein sequence
MGARRDRQFP SEGRGGIWMA PTRVPPNHVP APHGSFERLA DRYDQTRGGE RRGALIAASL 
APFLPTNTPV LDIGVGTGVV AKALAAQEVY VIGVDLSAAM LARATLRIGP RVAVGDAANL
PFADASIGGA YAAWVFQLVD DVARVLSETA RILRPGAPFA WIPARWLPSG NDVRDVLDNL
YSELGWNDQE SPPYVVQQAS SVGLSLISTT TLLDTTRPIT PAQAVQQIHD RAMSCLWDLN
PERWLRHVEP TIRRLKSLPG SDEPRETADI YQMYLFRRD