| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2814 |
|---|
| Symbol | |
|---|
| ID | 5671203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 3329479 |
|---|
| End bp | 3331239 |
|---|
| Gene Length | 1761 bp |
|---|
| Protein Length | 586 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641241723 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001507143 |
|---|
| Protein GI | 158314635 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGTTCG TCGAGGAGTC CGGCCGGCGG GAGCGGACGT TCGATTTCGC CGTTCTGCCG
GTCGAGCGGG ACGTCCAGCG ATGGCTGGCC CGGGTGTTCG CCCGCCGAGC CGGTCCACGT
TCGGCGACGA AACGGATGGG CACCGCCGTG GGGCACTTCG ATGTCCTTCG GGGCTTCGCC
GCGTCGCTCG CCGGGGCGTC ACCGTCCCCG CGCTGCCCGG TCGATCTGCG TCCCGCGCAC
GTCACCGCGT TTCTCCTGCG CTACCGCGGT CAGCCCAGCG AGCGGGAGTA TCTCAAGCGG
CTGCGAGTGC TGCTGCGTGA CGATCCGGAG CTGCCCGAGC CGACGCGAAC GGCGCTGTTG
TCCGCACGGC TCGCGCCGGC GGCGCCGGCG AACCCGCTTG TCGGCTACAG CGACACGGAA
TGGCAGCAGA TCATGACCGC GGTACGGCGG GACGTGCGGC TGGCCCGAGA CCGTATCCGG
GCGAGCCGCC AGCTGCTCGA TCGTTTCCGC GTCGGCGCCG TGCCGTCCGA GGGCCCGGAG
AGCGGGCTCG CCGTGTTGCT GGACGTCTTC GACCGCACCG GTGATCTTCC TCGGATCGAC
TCGGGCGGGC ATTCCCGAGC CGTTCGGGAC GCCGGTGGCA TGACCGCCAT CGGTGGGCGG
CTGTGCCTGT CCAGCGACGA GGCGGTCGCG TTCTGCCTGC TGCTGGTCGC GTTGACCGGG
GAGAACTTCG GCACCGTCGC CGCGTGGCCG GCGGCACACC ACCTGCCCGA CGGTGGCCAC
GGCGACACCG GTATCGCCCT GGTCGAAGCG GTCAAACCGC GACGCGGACC CGACCGGGAG
CACATGGTCA TCGCGCTGGA GGACCTGCCC ACCGGACTGG AGGCATCCGG TGAGGAGACA
CGGCTGTTCC GTTCGCCGCT GCGGGTCTAC CGGCTGCTGG TGGAGCTGAC CGAGCTCTCC
CGCCGGCACG GCGTCCACAC GTCGGCGTTC AGCGCCTTCG TCGCCCGGCC CGGCCGGCTC
GGCTCCCGCT GGGCCGAGGG GGTCAACGCC ACGGACCTGC TCTGGTGGGC CCGACGCCGC
GACTTTCCCG CCGCAGCCGA CGCAGGTCCG GGCACGAAAC CGGCGGTGCA CGTCGGACGC
CTGCGCCAGA CCGTGATCGA ACGCCGTCGG CAGCCGGTCG CCCATACCCG GCAGACCATG
AACGACCACT ATCTGCGGCG CAGCCGCACG GTCCAGGACG ACAGCCGCAT GGTGGTCGGT
GCCGCGCTGC GCGAGCAGGT CGACAGCGCG CGGACAGCCC AGAGCATGCC CGTACTCACC
GTCGCCTTCC TTGCCCACGC CCGCCGCGAC CCCGCCGCCG CGGCGGCCAC GGCCGGGATG
GACCAAGACA CCCTGCGCCG CCTGATCTCC GGGGTGCAGG ACACCGCCCT TGCCTCCTGC
GCGGACCACC GCAACGGCCC GCACACCACG GCGGGACAGC CCTGCCTGGC GTCGTTTCTG
GACTGTCTGG ACTGCCCGAA CGCCCGCGCG CTGCCCCACC AGCTCGGCGT GCAGATGCTG
GCCGCCGAGC GGCTGCGCGC GCTGCGACCG AACATCACCC CGGCTGTCTG GGAGGCGCAC
TTGCGCCGGC GTCTCGACCA GCTGGAGGAG ATCCTGAACC ACTACACTGC GGCCGAACGC
GACCACGCCC GCGCCACCGT GACCGCCCGC CAGCAGCAGC TCGTAGACGA CCTGCTCGAC
GGCCGATGGG ACCTGCGATG A
|
|---|
| Protein sequence | MRFVEESGRR ERTFDFAVLP VERDVQRWLA RVFARRAGPR SATKRMGTAV GHFDVLRGFA
ASLAGASPSP RCPVDLRPAH VTAFLLRYRG QPSEREYLKR LRVLLRDDPE LPEPTRTALL
SARLAPAAPA NPLVGYSDTE WQQIMTAVRR DVRLARDRIR ASRQLLDRFR VGAVPSEGPE
SGLAVLLDVF DRTGDLPRID SGGHSRAVRD AGGMTAIGGR LCLSSDEAVA FCLLLVALTG
ENFGTVAAWP AAHHLPDGGH GDTGIALVEA VKPRRGPDRE HMVIALEDLP TGLEASGEET
RLFRSPLRVY RLLVELTELS RRHGVHTSAF SAFVARPGRL GSRWAEGVNA TDLLWWARRR
DFPAAADAGP GTKPAVHVGR LRQTVIERRR QPVAHTRQTM NDHYLRRSRT VQDDSRMVVG
AALREQVDSA RTAQSMPVLT VAFLAHARRD PAAAAATAGM DQDTLRRLIS GVQDTALASC
ADHRNGPHTT AGQPCLASFL DCLDCPNARA LPHQLGVQML AAERLRALRP NITPAVWEAH
LRRRLDQLEE ILNHYTAAER DHARATVTAR QQQLVDDLLD GRWDLR
|
|---|
| |