Gene Franean1_2803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2803 
Symbol 
ID5671192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3318646 
End bp3319098 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content67% 
IMG OID641241712 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_001507132 
Protein GI158314624 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0117] Pyrimidine deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAGC TCGACGACCA CCATTGGATG ACCCGGGCCA TCGAACTCGC CCACCGCTGC 
CCGCCCGCCA CCGGCGCCTA CTCGGTCGGC GCTGTCATCG TTGACGAAAA CAACGAGGAG
ATTGCCTTCG GCTTCTCCCG CGAGGTCGAC GACGCGGTGC ACGCCGAGGA ATCCGCACTC
GCGAAGATCG ACCCCGCCGA CCCTCGGCTC GCCACCGCGA CGATCTACAG CACCCTCGAA
CCCTGCTCGC AGCGCAAATC CCGGCCACGC ACCTGCACCC AGCTCATCCT GGAAGCGAAG
ATCCCCCGGG TGGTCATCGC CTGGCGCGAA CCCAGCCTCT TCGTCGCCGA CTGCCAAGGC
TACGAACTCC TCACCCAAGC CGGCGTCACC GTCGCGGAAC TGCCTGAGCT CGCCGAGCAG
GCCCGTGCCA TGAACGCCCA CCTGTCAGTC TGA
 
Protein sequence
MPQLDDHHWM TRAIELAHRC PPATGAYSVG AVIVDENNEE IAFGFSREVD DAVHAEESAL 
AKIDPADPRL ATATIYSTLE PCSQRKSRPR TCTQLILEAK IPRVVIAWRE PSLFVADCQG
YELLTQAGVT VAELPELAEQ ARAMNAHLSV