| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2802 |
|---|
| Symbol | |
|---|
| ID | 5671191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 3316962 |
|---|
| End bp | 3318575 |
|---|
| Gene Length | 1614 bp |
|---|
| Protein Length | 537 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641241711 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001507131 |
|---|
| Protein GI | 158314623 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGC CCAGCCAAAG GGTTGAGCAG GACGAGTTGC GGACTCGGAT GCGCGCGACC
GGCATGAGCC ACCACGAGAT CGCGATCGAG TTCGCCCGCC GCTACCGGCT ACGCCCCCGC
GCTGCCTACC GTGTCGCCCA CGGCTGGACA CAGCAGCAGG CCGCCGACCG CATCAACGCC
CACGCCGTCC GTGCCGGCCT CGACCCGGAC GGCACCGCCC CGATGACCGC GCCGCGGCTA
TCGGAGGTGG AGAACTGGCC TCGCCCTGCC CGGCGACGTC CCACCCCGCA GATCCTCGCC
CTGCTTGCCG AGGTGTACGG ATGCGATCTC CACGCCCTCG TCGACGTGGA CGATCGCGAA
CACCTCCCTC CGGCAGACGT GTTCCTGATC AACGGCATGC GCCGGCTGCC GGACGGCGTG
GCTGCGTCAT CGACGGCCTC TCCGATCACA CTCGCGGGGA AACGATGGGG AACGACCACC
GAACGACCGG TTGACGTCGC CTTCGGCGCC GCCAGAGCTG GGCAAGCACC GGCCCCCAAC
TCGGTCGGTC TCGCAGACAA AGACAACGTG ATCATTTTTC CGCAACTCGC CCCGGATGGG
AGGATCGTCC TCATGCCACT CGATCGCCGG GGTTTCCTGA GCGGCCTGGG CCTCACCGCC
GCCAGCAGCG CAGCCCTCAG CCCGCTCGCC ACGATGCCAC CAGGATCGTC CTCCATCGAC
CCACGTGTCG TCGATCACTT CGCACGCCTG CGGGCCGTGC TCGCGGAGAA CGACAACCTC
TTCGGGCCGC GCCAGGTCAT CACCACAGCG CAGGAACAGG CCGGCCTCAT CGCCGCCCAT
CTCCGCCACG GCACGAGTTC GCGTCCACAA CGGCAGACCC TGCTCCACAT CCAAACGCAG
TTCGCTGATC TCCTCGGCTG GCTCCATCAA GACAGCGGCG ATAACGCCAC CGCTGGATAC
TGGCTCGACC GAGCGCTGGA ATGGTCACAC CGAGCGAGCG ACCCCAACGC CACCGTGTTC
ATCCTTGCCC GCAAAAGCCA ACTCGCCGCA GACCGTGGCG ACCCAGCTGA AGCCGTCGAC
GTCGCCGACG CAGCCCTGAC CAGCGCGGAG CCAACCGGTC GTCTCGCCGC CATCGCCGCG
ACCTACAGCG CGCATGGCCA CGCACTACGC GGCGAGAAAA CCACCTGCCT GACGCTCTAC
GACCGCGCCC ACGACATCCT CGACCAGGCC GGACCCGACA CCGACCCCTG GGGCGAGTTC
TTCAGCCCTG CCTACATCGA AGTCCAGCGG GCACACAGCC TCGCCGCACT CGGTGACTAC
CCTGCTGCAG CCACCGGGTT CCGGACCGCG ATCGACGGTC TCCCCTCGGC TTTCCACCGC
GACCGCGGTG TCTACCTCGC CCGCGAAGCC CTCGCACACG CAGGAGCACG CGAACCAGAG
CAAGCCGCGA CACTCGGTCT CAACGCACTC ACGGTCGGCG CCAGCACGCA CTCCGGATGC
ATCATGACCA GTCTGCGGTC CCTGCGTGAC GCCGTCGCCG GATGGCAAAC TGTCTCCCAG
GTACGCGAGT TCCGCCAGGC GATGGACCAG GTCCCCACGG CCATCACCGT CTGA
|
|---|
| Protein sequence | MNKPSQRVEQ DELRTRMRAT GMSHHEIAIE FARRYRLRPR AAYRVAHGWT QQQAADRINA
HAVRAGLDPD GTAPMTAPRL SEVENWPRPA RRRPTPQILA LLAEVYGCDL HALVDVDDRE
HLPPADVFLI NGMRRLPDGV AASSTASPIT LAGKRWGTTT ERPVDVAFGA ARAGQAPAPN
SVGLADKDNV IIFPQLAPDG RIVLMPLDRR GFLSGLGLTA ASSAALSPLA TMPPGSSSID
PRVVDHFARL RAVLAENDNL FGPRQVITTA QEQAGLIAAH LRHGTSSRPQ RQTLLHIQTQ
FADLLGWLHQ DSGDNATAGY WLDRALEWSH RASDPNATVF ILARKSQLAA DRGDPAEAVD
VADAALTSAE PTGRLAAIAA TYSAHGHALR GEKTTCLTLY DRAHDILDQA GPDTDPWGEF
FSPAYIEVQR AHSLAALGDY PAAATGFRTA IDGLPSAFHR DRGVYLAREA LAHAGAREPE
QAATLGLNAL TVGASTHSGC IMTSLRSLRD AVAGWQTVSQ VREFRQAMDQ VPTAITV
|
|---|
| |