Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2762 |
Symbol | |
ID | 5671151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3272508 |
End bp | 3273770 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641241671 |
Product | transposase IS4 family protein |
Protein accession | YP_001507091 |
Protein GI | 158314583 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCGTC TCCCGGGGGC TCTTGAACTG CCCGCAGTTA CCAGCGACCG ACTGACAGAT CGCATTTCTC TCGGCGTTCT CGCGCGTATC GTTCCTCGAG ACCTGGTCGA CGAGGTGCTC GCGGAGACGA GACGGCTGGA ACAGCGGAAG AGGCTGCTAC CAGCGAGAGT CGTCGTGTAT TTCACGATGG CCATGTGCCT GTTCTTCGAC GACGACTACG ACGAAGTGAT GCGCAGGCTC GTGGGCACGC TGCGCTGGCT CGGCTCCTGG AAAGGAGACT GGAAGGTCCC CAGCACCGGA GCGATCTCCC AGGCCCGGAC ACGTCTCGGC CCGGAACCGT TGAAGCTGCT GTTCGAACGG GTCGCCGTGC CAGTCGCCGG CCTGGGCACG AAAGGCGCCT GGCTCGGCTC CCGCCGACTT GTCGCCGTGG ACGGCGTCCA CCTCGACACC GCGGACACCC CCGAGAACGC CGACGCGTTC GGCCGTTTCA GCCACGGACC GAAGACCGCC GCCTTTCCCC AGGTACACGT CGTCGCGCTC GCCGAATGCG GTACCCATGC GGTCTTCGCC GCCGCCATCG GCGCCTACAC CAGCGACGAA CGGTCGCTCG CTGCCACGCT GTTCGACGCC TGCGAGCCGG GCATGCTCCT CACCGCCGAC CGCAACTTCT ACGGCTACGG CCTGTGGCAA CAGGCCCTCG CGACCGGTGC GGACCTGCTC TGGCGAGTCA ACGCGAACCT CACGCTCCCC GTCATCCGAG CCCTGCCCGA CGGCTCCTAC CTCTCTCTCC TGATCGACCC CAAGATCCCC GTCGCCAGAC GTGGCCAGCT CATCGCCGAC GCCCGTGCCG GCCACGCCCC ACCCACAGAG TCAGCCCTAC CAGTCCGAGT CATCGAGTAC TCCGTACCAG ACCACGAAGA AAACGGCACG AGCGAACTCA TCTGTCTGAT CACCAACATC CTCGACCCCA CCGACGTGGC CGCCATCGAA CTCGCGACCT CCTACCACGA ACGATGGGAA ATAGAAAGCA CCTTCGATGA AATCAAAACG CACCAGCGAG GCGAGAAACG GGTCCTACGC TCCAAAAATC CCGAACTCGT CAAACAAGAG ATCTGGGCCC TCCTACTCAC GCACTACGCC ATACGAAGCC TCATGATCGA GGCCGCCGAC GAGGCCGATA TCGACCCCGA CAGACTCTCC TTCATGAGAA CACTACGGAT CACACGCCGC CAGGTCACCG ACCAGGCGGA TTTTTCCCCC TGA
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Protein sequence | MARLPGALEL PAVTSDRLTD RISLGVLARI VPRDLVDEVL AETRRLEQRK RLLPARVVVY FTMAMCLFFD DDYDEVMRRL VGTLRWLGSW KGDWKVPSTG AISQARTRLG PEPLKLLFER VAVPVAGLGT KGAWLGSRRL VAVDGVHLDT ADTPENADAF GRFSHGPKTA AFPQVHVVAL AECGTHAVFA AAIGAYTSDE RSLAATLFDA CEPGMLLTAD RNFYGYGLWQ QALATGADLL WRVNANLTLP VIRALPDGSY LSLLIDPKIP VARRGQLIAD ARAGHAPPTE SALPVRVIEY SVPDHEENGT SELICLITNI LDPTDVAAIE LATSYHERWE IESTFDEIKT HQRGEKRVLR SKNPELVKQE IWALLLTHYA IRSLMIEAAD EADIDPDRLS FMRTLRITRR QVTDQADFSP
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