| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2761 |
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| Symbol | |
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| ID | 5671150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3268666 |
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| End bp | 3272019 |
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| Gene Length | 3354 bp |
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| Protein Length | 1117 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641241670 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_001507090 |
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| Protein GI | 158314582 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.645221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.818272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGTCAA GTGCCCGTGC GGGCAGAGGA AGTATCGCGG GGTCGTCCGG CGACGGCGGG
GTGGAATTCA GGCGGGCCGT CGCTGCCTAT GCGGTCGTGG CTGGGCTCTC CGACACTCCG
CTGCGTGGTC TGGGCATCTC CGAGGTCGAC GCGCGGGTGA CCGCGGTGGT GCTGGAGACC
GAGGATGCGG TCGACGATCT GCGGGTTGAC TTCGCGACCG GTGGGACGGC GTACATCCAG
GCGAAGAGGA CCTTACGGGG AGGCACCGTC CTCGCGAAAG CGGTCGCGCA GTGGGCGCGC
GCGGGCGAGG GGCCACTGGA CCCGGCCCGC CATCGGTTGG TGATCGCAGC GGGTGAGCTG
TCGGACTCGA TGAAGGCGCT GCGCCGGGCT CTCGACGCGC GGCGGTTGTC GGTCCCAGGA
ACTCCGAGCC CGCAGGAAGC GGAACAACTT CACCGCGTCG AGGAGCTGTT GTCGCCGCTC
AACCCTGCGG CACGAGACAT CGTGCTTCAG TGCGCGGTCG TCTGGCATCT TGACGTCGAG
GAGACGGACC GCGCCGACGC GCAGAACGCC TTGCATCAGC TACGCGGGCT CGTCGCGGGC
GGAGACGCCC CGGCGGCAGG CAACGCGTGG TCGGCGCTGC TTGATGCTGC TGGGTATGCG
GCTCGCCGCC GCGGTGGCCA TAATCTCGAC GGTTGGCGAA CCGCGATGCG CGATCGCGGC
ATCGGTCTCG TCGAGCACAG CAACGCACCT GAACACTCTG GGAGCCAGTC CAGCCTCGCC
CGGCCATCCA GCCATCCGAT TGGGGACCAC GACCTGCGGG GCCGGCTCAC GCTGCAACCG
CCGGTCCGCG CGCCACGACT GAGGGGAAGC CTGGCGTCGG CGACCCGGCC TGGCAGGACG
AGGTGGCTAT GGGGGGCCGC CCTGGCGGCC GTTCTGATAA TGGGGGCGGG TACCGCGATC
TATTCGGTGC ATGACCGGCA GGCTTCCGCG ACTGACGAGC GGAACCTGGC TGACTCCCGC
CAGTTGGCAG CCGACGCGGA GAGCACGCGG GACAGCGACC CGAACCTGGC ACGCCAACTG
GCTGTGCTGG CATGGCGCAC CGCGCCGACC ATGGAGGCAT GGCGAGCACT GTTCGCGGTC
GCCGATCTGC CGACCGATGT CGACGTGGAC GATCAGGTCC TGGCGGTGGG CCGCGTCGGT
GAGCGGTTCG TCGCCGTCAC CGCGCTGTCC ACGAAGGCCC AGCTGTGGGA TGTCACCCGG
GTCAGCCGCA AGGCCGAACC ACTGGCCGTG CTGCCGGGCC AAGGTCGGGT CACCGCGGCG
GTCTTCAGCC CGGATGGTCG ACGGCTCGCG ACCATGGCAG TCGACGGCAG CGTCCTGGTC
TGGAACGTCG AGAGTGCCAC CGCCGGACCG CCCGGGAACA ATCCGGTGGA GCTCACAGCA
CTAGCGTCCC TGCCCGGGAA CGACTCCAAC TCGCCAGCAA TGGCCTTCAA CTCCGACGGC
ACCCTGCTCG CGGTCCCCGG CCCCGAAGGG TCGGTGGAGG TCTGGAACAC CCGGCTGCCG
GCCGGGAGCG CCTCCGCTCA GAACAGCACA GGCCCCGACC TCGAGGCCCT GCCGCTCCAA
ATCCCCGGCG TCGTCAGCGG CATCGACGAT CCCGGCGTGT CCGCGCTGGC GTTCACCCCC
GACAGCGGTC GGCTGGCCGT TGGAACGTCC GGGGGAACCT TCGCTGTCTT CGCTCTGGGG
CGGTCGGCGG AACCACTGAT GCGGCGGACC AACTATGCCG GCGCCATGAA CGCCGACGCG
GTCGAAGGCA CTGCGGGACA GGCGACGCCA CCGGACACGA TGGAAACCAG CCACCTCCCG
CCGCAGCGGC AACCCGTCAC GCGACTGCTG TTCCGGCCGG ACGACGGCGC GACCCTCGCC
GTGGCTGGAG GCGACGGCGT GGTGCGCCTG TGGGACGTCG CCGGGACCGA TCCCACGCTG
GCATCGCAGA ACGCCCCCGC GAACCTGCCC ACGAAGCCGA CCGCGGAACT CGGCGACGGC
GCGGCCGCCG TTGACGCCAT CGCCTACAGC GCCGACGGCC TCCACCTGGC CGTTGGCTTC
GGGGCCAGCG GTGGGACCGT CAACGTATGG GACGTCACCG ACGAGAGCAG CCCGGCCCAA
GGCGCCCCCA TCGAGCGGCT CAACGACTCG CCGACCTCCC TGACCTTCGA CCGGGCCGGT
CAGACCCTCG CGGTCGGGAC CAAGGACGGT GCTGTGCGGC TGTCGACCGT TGCGTCTCCC
GGGATGCCTC AGCCCAGACT CACGGTGCCG GACATCCTCG GGGACCATGT GGCGGTGAAC
GGCGCGGGAA CGACCGTCGC TGTATCGCTC GCTGTCGACG GCGTGGACGG CGCGATCGAG
ATCTGGGATC TCCGCGCCGG ATCGAGCGAG CCGACCGTCA CGTTCCCCGG CCGCGACGCG
ACGGTCTACT CGATCGCGAT CAGCCCGGAC GGCGCCCTGC TCGCCGCCGG ATACGACGAC
GGGGTCGTCA GGGTGTGGGA CCTGCGCGCT GCCCTCTCGA CACGCGCCGC CGCATCACCT
GTGGCCGACC TCGCCGAGCA CGGCGCGATC GTGCAGGGCC TCGCCTTCAC CAGCGACGGC
AGACTGCTCG CGTCCGGAGA CCAGGACGGG ACGATCAAAC TCTTCCGACT CGACGGCACC
CATCCCCCGA AGCGCATCGC CGAGGCGGCA TCCACCCACG GCTCGGTCCA GGGAATCACC
TTCAGCGCCG ACAACGGAAC ATTGGTGACT GGCGGTGATA GCGGTGTGGG CGTCTACGAC
GTCCCGGACG TCAGCACCGG CGGGCCGCTG ACCACGGTCA CCGACATCTC GGACGCAACC
ACTGGGAACC TCTCCGGAGG TGTCGCGCTC AGCCCCGACG GACGCACACT CGCCGTCGGC
GGCCACGGCA CCGTCACGAC CTGGGACATC ACCGGCCCGA CGCCACAGCA GCAGGGCACA
TCCCTCCCTG TCGGAAGCAA GGAGGCGGCG GTGAGCACGG TTGACTTCAG CCCGGACGGC
CGCCTGCTGA CGGCAGCCGG CAACGACGGC GACATCGCAA TCTGGGACAC CAGCCGCCCC
GGCCAGCCGA AGCCGCTCAC CAACCTCCCC GGCCACGACA ACGGAACCCG CCTCGCGGCG
TTCACCGACG ACAGCCGAAC ACTCGTGACT CTCGGCTCCG ACTACCTCGC GAAACAATGG
GACGTCGACC CCGAAACACT CGTCGGCCGC GCCTGCAACG GAGTCTCCCA ACCGATGACC
AAGACAGACT GGCGCACCTT CGTCAACAAC CGCGAGTACG CCGCGCCGTG CTGA
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| Protein sequence | MPSSARAGRG SIAGSSGDGG VEFRRAVAAY AVVAGLSDTP LRGLGISEVD ARVTAVVLET
EDAVDDLRVD FATGGTAYIQ AKRTLRGGTV LAKAVAQWAR AGEGPLDPAR HRLVIAAGEL
SDSMKALRRA LDARRLSVPG TPSPQEAEQL HRVEELLSPL NPAARDIVLQ CAVVWHLDVE
ETDRADAQNA LHQLRGLVAG GDAPAAGNAW SALLDAAGYA ARRRGGHNLD GWRTAMRDRG
IGLVEHSNAP EHSGSQSSLA RPSSHPIGDH DLRGRLTLQP PVRAPRLRGS LASATRPGRT
RWLWGAALAA VLIMGAGTAI YSVHDRQASA TDERNLADSR QLAADAESTR DSDPNLARQL
AVLAWRTAPT MEAWRALFAV ADLPTDVDVD DQVLAVGRVG ERFVAVTALS TKAQLWDVTR
VSRKAEPLAV LPGQGRVTAA VFSPDGRRLA TMAVDGSVLV WNVESATAGP PGNNPVELTA
LASLPGNDSN SPAMAFNSDG TLLAVPGPEG SVEVWNTRLP AGSASAQNST GPDLEALPLQ
IPGVVSGIDD PGVSALAFTP DSGRLAVGTS GGTFAVFALG RSAEPLMRRT NYAGAMNADA
VEGTAGQATP PDTMETSHLP PQRQPVTRLL FRPDDGATLA VAGGDGVVRL WDVAGTDPTL
ASQNAPANLP TKPTAELGDG AAAVDAIAYS ADGLHLAVGF GASGGTVNVW DVTDESSPAQ
GAPIERLNDS PTSLTFDRAG QTLAVGTKDG AVRLSTVASP GMPQPRLTVP DILGDHVAVN
GAGTTVAVSL AVDGVDGAIE IWDLRAGSSE PTVTFPGRDA TVYSIAISPD GALLAAGYDD
GVVRVWDLRA ALSTRAAASP VADLAEHGAI VQGLAFTSDG RLLASGDQDG TIKLFRLDGT
HPPKRIAEAA STHGSVQGIT FSADNGTLVT GGDSGVGVYD VPDVSTGGPL TTVTDISDAT
TGNLSGGVAL SPDGRTLAVG GHGTVTTWDI TGPTPQQQGT SLPVGSKEAA VSTVDFSPDG
RLLTAAGNDG DIAIWDTSRP GQPKPLTNLP GHDNGTRLAA FTDDSRTLVT LGSDYLAKQW
DVDPETLVGR ACNGVSQPMT KTDWRTFVNN REYAAPC
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