Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2753 |
Symbol | |
ID | 5671144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 3260540 |
End bp | 3261280 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641241665 |
Product | integrase, catalytic region |
Protein accession | YP_001507085 |
Protein GI | 158314577 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.584748 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGACA CGTTCGAGTT CATCGATGCG GAGTACGCCG CCCGCACCAC CACGAACACC AGTGCACCAG CGCCGTCGGT CATCCAGATG TGCGCCTGGC TTAGTGTCTC CCGTTCGGGT TTCTACGAGT GGCGTGACCG CCCCGCCTCC GCGACCGCGA CCCGCCGCGG CGCACTCGCC ACACTCGTCG TTCGGTCGTT CACCGCCTCC GACGGCACCT ACGGCTACCG CCGTGTGCAC GCTGACCTGC TCGCCTGGGG CCGCCCCTGC AGCCCCGAGC TCGTCCGCGC CCTCATGCGC GAGCAGGGCC TGGTGCCCTG CCAGCCCCGC CCCTGGCGAC ACACCCTGAC CGAGCCCGGC CAGACCCCGG CCGCGATCCC CGACCTGCTG CAGCGCGACT TCACCGCCGA CACTCCCGGA ACCAAAATGG TCGGCGACAT CACCTACATT CCCACCTGGG AAGGCTGGCT GTATCTCGCG ACCGTCATCG ACTGCCACAC GAAAGCCGTC ATCGGCTGGG CAATGGACGA CAACTACAAG ACCGGGCTCA TCGAAACAGC CATCACCATG GCCGCCCGTA ACCACCAGCT CACCGACGGG GCGATTTTTC ATTCGGACCG CGGAAGCAAC ACCGAACTCA ACCGGTCCTC GCAACACCGG GTTGGTGGAG TGAGAGTAGC TGGTTGTTCA TCGCTTCGGT GGAGGTCTTC CAGTCGAGGG TCTTGCGGGG CCGGTCGTTG A
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Protein sequence | MSDTFEFIDA EYAARTTTNT SAPAPSVIQM CAWLSVSRSG FYEWRDRPAS ATATRRGALA TLVVRSFTAS DGTYGYRRVH ADLLAWGRPC SPELVRALMR EQGLVPCQPR PWRHTLTEPG QTPAAIPDLL QRDFTADTPG TKMVGDITYI PTWEGWLYLA TVIDCHTKAV IGWAMDDNYK TGLIETAITM AARNHQLTDG AIFHSDRGSN TELNRSSQHR VGGVRVAGCS SLRWRSSSRG SCGAGR
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