Gene Franean1_2752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2752 
Symbol 
ID5671143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3260253 
End bp3260543 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content62% 
IMG OID641241664 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_001507084 
Protein GI158314576 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.446829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.548217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGCAGA GGCGCAGGAA GTTCTCGCCT GAGTTCAAGG ACGAGGCCGT GAAGATGGTG 
ATCGAGACAT CCCGTCCGAT CTCCCAGGTC GCGGTTGAAC TCGGCATACT GGAGGGAACC
CTGGGAACTT GGGTCGCCGC CTACCGGCGA GCCCACGCCG ACGAGGAACC ACCGCCCACC
GTCGACGAAC GCGCCCGGCT ACGTGAACTC GAGCGGCAGA ACCGCGAGCT GCGCATGGAA
AACGAGTTCC TGAAAAAAGC CGCAGCGTAC TTCGCCAAGG ATCATCGGTG A
 
Protein sequence
MTQRRRKFSP EFKDEAVKMV IETSRPISQV AVELGILEGT LGTWVAAYRR AHADEEPPPT 
VDERARLREL ERQNRELRME NEFLKKAAAY FAKDHR