| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2726 |
|---|
| Symbol | |
|---|
| ID | 5671117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 3223745 |
|---|
| End bp | 3224959 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641241638 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_001507058 |
|---|
| Protein GI | 158314550 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGACAG CGGTCATCTG TGAACCGGTG CGCAGCGCCG TCGGGGGCTA TGGCGGCGTC
CTGAGATCTC TGAGTTCCCA CGAGCTGGGG GCGGCGGTCG TACGGGGTCT GCTCGACAGG
ACTGGTCTGT CCAGCCCCGA CATCGACGAC GTGTTGTTCG GTTCGTGCTA TCCGACCATG
GAGGCGCCAG CGCTGGGACG GGTGGTTGCA CTCGACGCCG GGCTCAGCGT GGGGGTCTCC
GGTCTCCAGC TGGACCGGCG ATGCGGTTCC GGGGTCCAGA CCGTCATTAC GGCCGCGATG
CAGGTCCAGA CAGGGGCCGC GGACGCGGTG ATCGCTGGCG GCGCGGAAAG TATGAGCAAC
GCGGCGTTCT ACTCGACGGA GATGCGCTGG GGCTCACCGG GCGGAGCAGT CGTACTGCAC
GATGCCCTCG CACGGGGGCG GACCACCGCC GGCGGGGCTC GCTTTCCGGT ACCCGGCGGG
ATGATCGAGA CGGCGGAGAA TCTGCGCAAG GACTACGGGA TCTCCCGCGC AGAGCAGGAT
GAGCTGGCGC TCCGCTCACA TCAGCGAGCT GTCGACGCGC AGCGTTCCGG AAAGTTCACC
GAGGAGATCA TCCCCGTGAC GGTCACGACA CGGCGGGGCG ATGTCGTCGT GGATGCCGAC
GAGCACCCCC GGGCGGACAC GAGTATCGAG AAACTGGCGT CGCTGCGCCC GATCCTCGGC
CGGTCCGACC CGTCGGCCAC GGTGACGGCG GGTAACTCCA GCGGCCAGAA CGACGGCGCC
GCCGCCTGTA TCGTGACGCA TCCGGCGGCA GCGGAACGGC TCGGTCTTCG GCCGCTGGCC
CGACTCGTCA GCTGGGCCGT CGCCGGCGTC GCCCCCAACC GGATGGGGAT CGGCCCGATC
CTCGCGACGG CGAAAGCGCT CGACCGCGCC GGGCTCAAGC TCGCGGACAT GGACCTGATC
GAGCTGAACG AGGCGTTCGC GGCGCAGGTT ATCGCCTGTG GCCGGGAGTG GCGTTTCACC
GGGTCGGACT GGGAACGTCT CAACGTCAAT GGCTCCGGGA TATCGCTGGG GCATCCGGTC
GCCGCGACCG GCGGACGGAT TCTGGCGACA ATGCTGCGGG AGATGCACAG GCGGGATGCC
CGGTATGGCC TGGAGACCCT TTGCATCGGT GGGGGCCAGG GCATATCGGC GATCTTCGAA
CGCATCGACG GATAA
|
|---|
| Protein sequence | MRTAVICEPV RSAVGGYGGV LRSLSSHELG AAVVRGLLDR TGLSSPDIDD VLFGSCYPTM
EAPALGRVVA LDAGLSVGVS GLQLDRRCGS GVQTVITAAM QVQTGAADAV IAGGAESMSN
AAFYSTEMRW GSPGGAVVLH DALARGRTTA GGARFPVPGG MIETAENLRK DYGISRAEQD
ELALRSHQRA VDAQRSGKFT EEIIPVTVTT RRGDVVVDAD EHPRADTSIE KLASLRPILG
RSDPSATVTA GNSSGQNDGA AACIVTHPAA AERLGLRPLA RLVSWAVAGV APNRMGIGPI
LATAKALDRA GLKLADMDLI ELNEAFAAQV IACGREWRFT GSDWERLNVN GSGISLGHPV
AATGGRILAT MLREMHRRDA RYGLETLCIG GGQGISAIFE RIDG
|
|---|
| |