| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2718 |
|---|
| Symbol | |
|---|
| ID | 5671109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 3217187 |
|---|
| End bp | 3218338 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641241630 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001507050 |
|---|
| Protein GI | 158314542 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTGG GATTGAGCGT CGACCAGGAA CTCCTGGTCG GCACGACCCG GAAGTTCCTG
CAGGACAGCG TGCCCAGCGA GGCTCTGCGC GGCCTTCGGC ACCACCCGGC GGGGTACGAG
CCGGAGTACT GGAGGACAGG GGCCGAGCTG GGCTGGACCT CGCTGCTGGT CGCCGAGCAG
CACGGCGGCG GGAGCGTCAG TGGTGAGGGT CTGCGTGACC TGGCACTGGT CGCGTACGAG
TTCGGGCGCC AGGCGGCGCC CGGTCCGCTG CTGGCGACGA ACGTCGTCGC CGCCGCGCTG
TCGCGGGCCG GTGGGGAGCT GTGCCGGGAG GTGCTGGGCC GGATCAGCGC CGGTGACGCC
GTCGGCGCAT GGTGCCTCAG CGAGCCGGTG CCCCATGACG GGCTGGGTGA GGTCACCGCG
ACCGCCGTCG CGTCGGGTGC CGACTGGGTG CTCTCGGGTG AGAAGAGGCC GGTGGAGCAC
GGAGCCCAGG CGGAGTTCTT CCTGGTCACG GCTCGGACCG GCGACGGTCT CACGCAGCTC
CTCGTCCCCG CGGAGAGCTC GGGAGTGACG GTCACGCCCC TGAGGACGGT CGACCTCTCT
CGCCGGTTCG CCCGGGTCGG CTTCCGCGAT GTCCGGGTTC CGGCGACGGC TGTCGTGGGC
GAGCCGGGCT CGGCGGCGGC CGAGGTCGAA CGTCAGCTGC ACACAGCCCT TGTCATTCAG
ACGGCCGAGA CGGTCGGAGC GATGGACCAG GCATTCGAGC TGACGCTCGC CTGGGCGGCG
GACCGGTACT CGTTCGGCCG GCCGCTGGCC TCCTACCAGG CGCTGAAGCA TCGGTTCGCC
GACCTGAAGA TGTGGCTGGA GACCAGTCAC GCGGTGGCCG ACGCCGCCGC GGTCGCCGTC
CAGAACGACG ACGACAGGGC GGCGGAGCTG GTCAGCGTGG CGAAGTCGTA CGTCGGACAG
TACGGCCCGG AGCTGTGCCA GGACTGCGTC CAGCTACACG GTGGCATCGG CGTGACCTTC
GAACACGACC TGCATCTGTA TCTCCGTCGG GTGGTCCTCG CGAGTGCGCT TCTGGGCACC
GTGCGGGAAC ACCGCCTGCG GATCGCCACC CTTCTCGAAG CCGGGAACAG CGTGGGAGAG
GCCGGAGCGT GA
|
|---|
| Protein sequence | MKVGLSVDQE LLVGTTRKFL QDSVPSEALR GLRHHPAGYE PEYWRTGAEL GWTSLLVAEQ
HGGGSVSGEG LRDLALVAYE FGRQAAPGPL LATNVVAAAL SRAGGELCRE VLGRISAGDA
VGAWCLSEPV PHDGLGEVTA TAVASGADWV LSGEKRPVEH GAQAEFFLVT ARTGDGLTQL
LVPAESSGVT VTPLRTVDLS RRFARVGFRD VRVPATAVVG EPGSAAAEVE RQLHTALVIQ
TAETVGAMDQ AFELTLAWAA DRYSFGRPLA SYQALKHRFA DLKMWLETSH AVADAAAVAV
QNDDDRAAEL VSVAKSYVGQ YGPELCQDCV QLHGGIGVTF EHDLHLYLRR VVLASALLGT
VREHRLRIAT LLEAGNSVGE AGA
|
|---|
| |