| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2712 |
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| Symbol | |
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| ID | 5671103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3208749 |
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| End bp | 3209516 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641241624 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001507044 |
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| Protein GI | 158314536 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.518029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATCTGA TAGGGCGTTC GGCGATCGTC ACCGGCGGCG CCGGCGGGCT GGGTGCCGCG
TGCGTCCACC GTCTGACGGA GGTCGGTGTG AAGACCGTGG TCTTCGACCT CCACGAGGGC
CGCACGAAGG AACTCGCCGA CAAGATCGGC TCCACCGCCG CGGCGGTGAG TGGGGACGTC
AACGACGACG AGGCCGTGCA GGCCGCCGTC GACGCGGCAC AGGCCCTGGG CACGCTGTCA
GTCGTGGTGA ACGTCGCCGG GGGTGGCGCG GCCAGGCGGA CCGTCGCCCG CGACGGCACG
CCGCACGACA AGGCGACCTT CGTCAGGGTC ATGGAGATGA ACGCCATCGG CACGTTCAAC
GTGACCCGAC TCGCGGCGGC GGCGATGACT CGTAACAAAC CGACCGAGGA CGGGGAGCGC
GGCGTCGTGG TGAACACCGC GTCCATCGCC GGGCTCGAAG GCCAGGCCGG CCAGCTGGCC
TACGGTGCGG CCAAGGCCGC CATCCTCGGC ATGACGCTGC CGATGGCACG TGACCTCGCC
CCGGCCGGCA TCCGCGTCTG TGCGATCGCA CCGGGGACCA TGGGTACGCC GCTGATGCTC
TCGGCTCCGG ACGCGCTGAA GAACCGCCTG GTGGAGACGA TCCAGTTTCC CAAGCGGATG
GGCAGACCGG AGGAGTTCGC CCTGCTGGTG GAGTCCATCG TGCGCAATCC CTACCTCAAC
GGCGAGAACA TCCGCCTGGA CGGAGCACTG CGCTTCCCGC CGAAGTAG
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| Protein sequence | MDLIGRSAIV TGGAGGLGAA CVHRLTEVGV KTVVFDLHEG RTKELADKIG STAAAVSGDV
NDDEAVQAAV DAAQALGTLS VVVNVAGGGA ARRTVARDGT PHDKATFVRV MEMNAIGTFN
VTRLAAAAMT RNKPTEDGER GVVVNTASIA GLEGQAGQLA YGAAKAAILG MTLPMARDLA
PAGIRVCAIA PGTMGTPLML SAPDALKNRL VETIQFPKRM GRPEEFALLV ESIVRNPYLN
GENIRLDGAL RFPPK
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