Gene Franean1_2711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2711 
Symbol 
ID5671102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3207471 
End bp3208640 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content72% 
IMG OID641241623 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001507043 
Protein GI158314535 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.680147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAAG CAGTCATCGT CTCGACGGCC CGCACGGCCA TCGGCAGAGC CCGCAAGGGC 
ACGCTCGTCG GCCTGGACGC GTTCGAACTC GCCGAGGCGA TCGTCCCGGC CGCGCTGGAA
CGCAGCGGCA TACCTGCGCA GGACGTCGAC GACCTCGTCA TCGCCGAGTC CTTCCAGGGC
GGCGGGGTGA TCGCCCGGAA CATCGCCGTC CGCCTCGGTC TGCTCGACGT CTCCGGACTC
GCCACGAACC GGCACTGCGC CGGCGGCCTG TCCGCGGTCG CGATCGCCGC CGCTGGCATC
CGCGCCGACA TGGACCGGGT CGTCGTCGCG GGCGGCACCG AGAGCCTGAC CAACGCCGCC
CGCTCGTCCA GACGGGACGC AGCCGGCGAG TACCAGGCCT GGATGTCGCC GGCCCACCCG
GAGACTCCGG AGGCACCGAC TTTCGACATG TCCATCACCG TCGGCGAGAA CACCGCGCGG
GAGATGGGCC TCACCCGCCG CGACGTCGAC GAGTGGACGG TCTACAGCCA GGAACGCGCG
CTGGCCTCCA TCGACTCCGG GGCGTTCACC GACGAGATCA TCCCCCTCGA CGTCACCCGG
CCCGACGGCA CGACGGTCCG GTTCGACACC GACGAGCACC CGCGCCGCGG CACCACCCTC
GAGCGCCTCG CCGGGCTGCC ACTGCTGCAT CCCGAGATCC CCAACGCGAC CGTGACGGCG
GCGAACTCCG CCGGGCTCAA CGACGCCGCC GCGGCCGTGA CCCTCACCAG CGACGAGTAC
GCGGCCGCCC ACGGACTCAC GCCGCTGGCC CGGGTCCGTG CGTGGGCGAC CGCCGGCATC
GAGCCCGCGC TGACCGGGCT GGCACCCACC CTCGCGATTC CCAAGGCGCT CGACCGGGCC
GGTCTCACCC TCGGCGACAT CGACCTGTTC GAGATCAACG AGGCGTTCTG CTCGGTGCCC
GTGGCCGCCA TCCGCAAGCT CGGCATCAGA CCCGAGATCG TCAATGTGAA CGGCAGCGGG
GCGAGCCTCG GCCACCCGAT CTCCGCCACC GGCACCCGGA TGATCATCAC CATGGTCGGC
GAGCTGCGGC GCCGCGGCGC GACCCTCGGC TGCGTCTCGA TGTGCGCCGG CGGCGGCATG
GGCGCCGCGA TGATCATAGA GATCGGCTAG
 
Protein sequence
MTEAVIVSTA RTAIGRARKG TLVGLDAFEL AEAIVPAALE RSGIPAQDVD DLVIAESFQG 
GGVIARNIAV RLGLLDVSGL ATNRHCAGGL SAVAIAAAGI RADMDRVVVA GGTESLTNAA
RSSRRDAAGE YQAWMSPAHP ETPEAPTFDM SITVGENTAR EMGLTRRDVD EWTVYSQERA
LASIDSGAFT DEIIPLDVTR PDGTTVRFDT DEHPRRGTTL ERLAGLPLLH PEIPNATVTA
ANSAGLNDAA AAVTLTSDEY AAAHGLTPLA RVRAWATAGI EPALTGLAPT LAIPKALDRA
GLTLGDIDLF EINEAFCSVP VAAIRKLGIR PEIVNVNGSG ASLGHPISAT GTRMIITMVG
ELRRRGATLG CVSMCAGGGM GAAMIIEIG