Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2708 |
Symbol | |
ID | 5671099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 3203923 |
End bp | 3205101 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641241620 |
Product | amidohydrolase 2 |
Protein accession | YP_001507040 |
Protein GI | 158314532 |
COG category | [R] General function prediction only |
COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCCA ACCCGTCGCC CTACCCGATC TTCGACGCGG ACAATCACCT GTACGAGACT CAGGACGCGT TCACCAAGTA CCTGCCCGAG GAGTTCAAGG GCGCGATCCG GTACGTCGAG GTGGACGGCC GGACCAAGAT CGCTGTCCGG GGTCACATCA GCGAGTACAT CCCCAATCCG ACCTTCGAGG TCGTCGCCCG GCCGGGCGCC CAGGAGGAGT ACTTCCGCGT CGGCAACCCG GAGGGCAAGA CCTACCGGGA GATCATCGGG AAGCCGATGC GGTCGATCGC GGCCTTCCGT GAGCCGAAGT CGCGCCTGGA GCTCATGGAC GAGCAGGGCA TCGAGCGGTC GCTGATGTTC CCGACGCTGG CGAGCCTGCT CGAGGAACGG ATGAGCGACG ACCCGGAGCT GACCCATGTG GTCATCCACG CGCTCAACGA GTGGCTGTAC GAGACGTGGC AGTTCAACTA CGAGAACCGG ATCTTCACCA CGCCGGTGAT CACGCTGCCG ATCGTGGAGA AGGCGATCGA GGAGCTGGAG TGGGTCGTGG AGCGCGGGGC GCGGGCGGTT CTGATCCGTC CGGCGCCGGT TCCCGGGTTC AGCGGCTCGC GGTCGTTCGG CCTGCCGGAG TTCGACCCGT TCTGGGAGAA GGTCGTCGAG CACGACGTCC TGGTTGCGCT GCACTCCTCC GACAGTGGTT ACAGCCGGTA CACCGACGAC TGGGCGAGCA ACAAGCGGGA GTTCCTGCCG TTCCAGCCGG ACATCTTCCG GATGATCGGC CAGTGGCGGC CGATCGAGGA CTCGGTGGCC GCCCTGATCT GCCACGGCGC GCTGTCCCGG TTCCCCACCC TGAAGGTCGC CGTCGTCGAG AACGGCGCGT CCTGGGTCGC CCCGCTGATC AAGACCCTGA AGGACGTCTA CAAGAAGCAC CCGCAGCAGT TCGCCGAGGA GCCGGTGTCG GTGCTGCGGC GCAATGTGCA CATCAGCCCG TTCTGGGAAG AGAACATGGC TGACCTCGCC GAGCTGCTCG GCATCGAGCG GGTGCTGTTC GGCTCGGACT TCCCGCACCC CGAGGGCCTG GGTGACCCGG CGAGCTTCGT CGATGAGCTC AAGAACCTCT CCGAGGAGGA GAAGGCCCTG ATCATGGGCG GCAACCTGGC CAGGCTGATC CCGGTGTGA
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Protein sequence | MSSNPSPYPI FDADNHLYET QDAFTKYLPE EFKGAIRYVE VDGRTKIAVR GHISEYIPNP TFEVVARPGA QEEYFRVGNP EGKTYREIIG KPMRSIAAFR EPKSRLELMD EQGIERSLMF PTLASLLEER MSDDPELTHV VIHALNEWLY ETWQFNYENR IFTTPVITLP IVEKAIEELE WVVERGARAV LIRPAPVPGF SGSRSFGLPE FDPFWEKVVE HDVLVALHSS DSGYSRYTDD WASNKREFLP FQPDIFRMIG QWRPIEDSVA ALICHGALSR FPTLKVAVVE NGASWVAPLI KTLKDVYKKH PQQFAEEPVS VLRRNVHISP FWEENMADLA ELLGIERVLF GSDFPHPEGL GDPASFVDEL KNLSEEEKAL IMGGNLARLI PV
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