Gene Franean1_2708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2708 
Symbol 
ID5671099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3203923 
End bp3205101 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content66% 
IMG OID641241620 
Productamidohydrolase 2 
Protein accessionYP_001507040 
Protein GI158314532 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCCA ACCCGTCGCC CTACCCGATC TTCGACGCGG ACAATCACCT GTACGAGACT 
CAGGACGCGT TCACCAAGTA CCTGCCCGAG GAGTTCAAGG GCGCGATCCG GTACGTCGAG
GTGGACGGCC GGACCAAGAT CGCTGTCCGG GGTCACATCA GCGAGTACAT CCCCAATCCG
ACCTTCGAGG TCGTCGCCCG GCCGGGCGCC CAGGAGGAGT ACTTCCGCGT CGGCAACCCG
GAGGGCAAGA CCTACCGGGA GATCATCGGG AAGCCGATGC GGTCGATCGC GGCCTTCCGT
GAGCCGAAGT CGCGCCTGGA GCTCATGGAC GAGCAGGGCA TCGAGCGGTC GCTGATGTTC
CCGACGCTGG CGAGCCTGCT CGAGGAACGG ATGAGCGACG ACCCGGAGCT GACCCATGTG
GTCATCCACG CGCTCAACGA GTGGCTGTAC GAGACGTGGC AGTTCAACTA CGAGAACCGG
ATCTTCACCA CGCCGGTGAT CACGCTGCCG ATCGTGGAGA AGGCGATCGA GGAGCTGGAG
TGGGTCGTGG AGCGCGGGGC GCGGGCGGTT CTGATCCGTC CGGCGCCGGT TCCCGGGTTC
AGCGGCTCGC GGTCGTTCGG CCTGCCGGAG TTCGACCCGT TCTGGGAGAA GGTCGTCGAG
CACGACGTCC TGGTTGCGCT GCACTCCTCC GACAGTGGTT ACAGCCGGTA CACCGACGAC
TGGGCGAGCA ACAAGCGGGA GTTCCTGCCG TTCCAGCCGG ACATCTTCCG GATGATCGGC
CAGTGGCGGC CGATCGAGGA CTCGGTGGCC GCCCTGATCT GCCACGGCGC GCTGTCCCGG
TTCCCCACCC TGAAGGTCGC CGTCGTCGAG AACGGCGCGT CCTGGGTCGC CCCGCTGATC
AAGACCCTGA AGGACGTCTA CAAGAAGCAC CCGCAGCAGT TCGCCGAGGA GCCGGTGTCG
GTGCTGCGGC GCAATGTGCA CATCAGCCCG TTCTGGGAAG AGAACATGGC TGACCTCGCC
GAGCTGCTCG GCATCGAGCG GGTGCTGTTC GGCTCGGACT TCCCGCACCC CGAGGGCCTG
GGTGACCCGG CGAGCTTCGT CGATGAGCTC AAGAACCTCT CCGAGGAGGA GAAGGCCCTG
ATCATGGGCG GCAACCTGGC CAGGCTGATC CCGGTGTGA
 
Protein sequence
MSSNPSPYPI FDADNHLYET QDAFTKYLPE EFKGAIRYVE VDGRTKIAVR GHISEYIPNP 
TFEVVARPGA QEEYFRVGNP EGKTYREIIG KPMRSIAAFR EPKSRLELMD EQGIERSLMF
PTLASLLEER MSDDPELTHV VIHALNEWLY ETWQFNYENR IFTTPVITLP IVEKAIEELE
WVVERGARAV LIRPAPVPGF SGSRSFGLPE FDPFWEKVVE HDVLVALHSS DSGYSRYTDD
WASNKREFLP FQPDIFRMIG QWRPIEDSVA ALICHGALSR FPTLKVAVVE NGASWVAPLI
KTLKDVYKKH PQQFAEEPVS VLRRNVHISP FWEENMADLA ELLGIERVLF GSDFPHPEGL
GDPASFVDEL KNLSEEEKAL IMGGNLARLI PV