Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_2703 |
Symbol | |
ID | 5671094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3198080 |
End bp | 3198766 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641241615 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001507035 |
Protein GI | 158314527 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTGAAC GTACCCAACA CGGGACTGCA CTACCCAGCG CCCCCCGCGC GCGACGCGAC GAGGTGGAAG TAGGTAAGCG TCGCGGCACC GGGCGCACCC GCCGAGGCCG CGAGAGCCGC AGTCAGCTCG TCGATGCCGC CCGCGTCGTG TTCGAGCGTG ACGGTTTCCT CCATGCCAGG GTAGCCGACA TCTGCGATCT GGCGGGATTC TCCCACGGCT CGTTCTACAC GTACTTCGTC TCCAAGGAGG AGATCTTCCG GGAGGTGGTC GACTCGGTCG AGCTCGATCT CCTCACTCCC GAGCTGACCG GCTCCGACAC CGATCCGATC GAACGCATCC GCGCGGCCAA CCGTCACTAT CTGGAGACGT ACGCCGCCAA TGCCAAAATA ATGCAGGTCA TCCAGCAGGT CGCCACTTTC GACAACGACG TCCTCAAGAT CCGCCTTCAA CGCCACGAAG TCTTCGCTCA CGCCATCGAG CGACGAGTGC GGATACTCCA GGACGCCGAC TTCGCCGACC GCAACGTCGA CCCCGCGTAC GCCGCACAGG CACTCGGCGG GATGGTCGCC TACTTCGCAG ACCTCCTGTT CAACACCGAG AACAGCTCCG GCTTCGATCT CGAGACCGCG GTGAGCCAGC TCACCATCCT CTGGACGAAC GCGCTCGGAA TTCGCCCACA CCTCTGA
|
Protein sequence | MAERTQHGTA LPSAPRARRD EVEVGKRRGT GRTRRGRESR SQLVDAARVV FERDGFLHAR VADICDLAGF SHGSFYTYFV SKEEIFREVV DSVELDLLTP ELTGSDTDPI ERIRAANRHY LETYAANAKI MQVIQQVATF DNDVLKIRLQ RHEVFAHAIE RRVRILQDAD FADRNVDPAY AAQALGGMVA YFADLLFNTE NSSGFDLETA VSQLTILWTN ALGIRPHL
|
| |