| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2701 |
|---|
| Symbol | |
|---|
| ID | 5671092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 3195681 |
|---|
| End bp | 3196847 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641241613 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001507033 |
|---|
| Protein GI | 158314525 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACTG ACATCGAGGC GTACCGCGAA CAGATCCGGT CCTTCATCGC CGACCAGGGC
CTACGTCTGC ACCGCGAAGG TGTGCGCGTC CCGCGGGACT CCGACGAGGA ACGGACGATC
CGGGGATGGT TGCGGTCGCT GTACGAGGCC GGCTACCTCG GCGCCGGCTG GCCACCTGGG
TGGGGCGGAC GGCCGGGCCA TCTCCCGGTA CACGACCTGG CGCTGATGGA AGAGCTCATC
CGCGGTGACG CCTACCGCCC ACTCGACCAG GTGATGTTGG CCAGCCACGC GATCATCGCG
TTCGGAACCG AGAAGCAGAA GCAGGAGCTG CTGCCCCGCA TCCGTTCCGC GGAGCACATC
TGGTGCCAGT TGTTCAGCGA GCCGGACGCC GGCAGCGACC TTGCCGCGCT GCGCACGCGC
GCCGAGCCGG ACGGCGACGG GTTCCTCGTT ACCGGCCAGA AGATCTGGAG CACCGATGCC
CAATGGGCTG ACATGGGGAT GCTCGTCGCC CGCACGGACC CGGCTGTCGA GCGCCACGCT
GGGATCACCG CGTTCGTCGT CCCGATGAAC CTGCCCGGCA TAGAGGTCCG GCCCATCCGC
GAGATGACCG GATTCGCCGA GTTCTGTGAG GTGTTCCTCG ACGGTGTCCG CCTCGGCCCC
GAGCACGTAC TGGGCGACGT GAACGGCGGT TGGAAAGTCC TGACCTCAGG CCTGGCCTCC
GAGCGGGCGT TCGTCGGCGC TAATGCGGTT CAGCTCGACC GCATGTTTTC CGACCTGATC
TCCTTGGCAA CCGCCGCCCG CCAGCCCGAC GGCACAACAG CCCTCGAGCA CGAAGACGTC
CAGGCTCACC TCGCGACGGC CCTGGCACGG GTGGAAGAGG TCAAGCTCAT CGTGCGCGAC
ACCGTCGATC GAATTCTGGA CGACAACGAG CATCCGAGCG ACGGCCCCGT CGCCAAACTC
GCCTACACAG AGACGAACGT AGCGCTGACA GAACTTGCGA TGCAGCTCAT CACCTCGTCG
ACGTCAATCG ACGACGACGG CCTCGAGATC GCTGACCGCT GGTATCACAA CTATCTCTGG
GGCCGTGCGC TGACCATCTC CGGTGGCGCA TCAGAAATCA TCCGCGGCAT CATCGGCCGG
CAACTCCTCC ACCTTCCCCG GGCGTGA
|
|---|
| Protein sequence | MPTDIEAYRE QIRSFIADQG LRLHREGVRV PRDSDEERTI RGWLRSLYEA GYLGAGWPPG
WGGRPGHLPV HDLALMEELI RGDAYRPLDQ VMLASHAIIA FGTEKQKQEL LPRIRSAEHI
WCQLFSEPDA GSDLAALRTR AEPDGDGFLV TGQKIWSTDA QWADMGMLVA RTDPAVERHA
GITAFVVPMN LPGIEVRPIR EMTGFAEFCE VFLDGVRLGP EHVLGDVNGG WKVLTSGLAS
ERAFVGANAV QLDRMFSDLI SLATAARQPD GTTALEHEDV QAHLATALAR VEEVKLIVRD
TVDRILDDNE HPSDGPVAKL AYTETNVALT ELAMQLITSS TSIDDDGLEI ADRWYHNYLW
GRALTISGGA SEIIRGIIGR QLLHLPRA
|
|---|
| |