| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2699 |
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| Symbol | |
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| ID | 5671090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3193386 |
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| End bp | 3194147 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641241611 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001507031 |
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| Protein GI | 158314523 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.386082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCCG CAGTTGCCCG GGTCGCGATC GTCACGGGAG CCGCCCGTGG GATAGGCGCT
GCCACGGCCA TGCGCCTAGC CGCCGAGGGG ATGGCGGTCG CCGCCTTGGA CCTGAACGAG
TCCGCCGTCA AGAACACGGT CGACGCGATC GCCGTCGCGG GCGGCACCGC GCTGGCGGTG
GGAGCCGACG TGACCGATGC CGACCAGGCC ATGGCGGCCG TGGAGCGGGT GGCCGGCGAG
CTCGGACCCC CCACCGTATT GGTCAACAAC GCGGGCATCA CCCGCGACAA CCTGCTGTTC
AGGATGACCG AGACGGATTG GGACCTGGTA GTGGGGGTAC ACCTGCGCGG TACCTTCCTC
ATGACCCGTG CGGTGCAGGC ACACATGGTC GACTCCCGCT TCGGTCGGAT CGTGAATCTT
TCCAGCACCT CGGCGCTGGG CAACCGCGGC CAGGCCAACT ACGCGGCGGC GAAGGCGGGC
CTGCAGGGTT TCACCAAGAC CGTGGCAATC GAGCTCGGGA AGTTCGGCGT CACCTGCAAC
GCGATCGCGC CCGGTCTGAT CGACACCGAG ATGACCAGAA CCACCGCGGT TCGGCTCGGG
GAGTCCTGGG AGGCCTACGC CGCCCGTCGA GCGGCACAGA TCCCAGTGGC CCGGGTCGGC
CTCCCCGCTG ACATCGCGCA CACCGTTTCC TTCCTGGTCA GCGAGGGCGC CGGGTTCGTC
TCGGGCCAAG TCCTCTACGT TGCTGGCGGG CCGAAGACCT GA
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| Protein sequence | MSSAVARVAI VTGAARGIGA ATAMRLAAEG MAVAALDLNE SAVKNTVDAI AVAGGTALAV
GADVTDADQA MAAVERVAGE LGPPTVLVNN AGITRDNLLF RMTETDWDLV VGVHLRGTFL
MTRAVQAHMV DSRFGRIVNL SSTSALGNRG QANYAAAKAG LQGFTKTVAI ELGKFGVTCN
AIAPGLIDTE MTRTTAVRLG ESWEAYAARR AAQIPVARVG LPADIAHTVS FLVSEGAGFV
SGQVLYVAGG PKT
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