| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2686 |
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| Symbol | |
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| ID | 5671077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3178548 |
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| End bp | 3180218 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641241598 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001507018 |
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| Protein GI | 158314510 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGGGC TCCGCGTAGT CGGGGGCGTT GTGCCAGGCC TTCTGCGTTC GGCTGACTGG
TCCCACGTGC CACGGTTGTT CCGGTACGCC TTGGCGGGCT GCCTGCTGTA CGTCGGGCTG
GCGGCTGTGT TCGCGGCGCT GCTGGCCCCG GGGCCGGCCG GGATCGCCAC GACACTCGTC
GCGTTCGCCT CCGAGGTCAC CGCCGCAGTG GCCTGCTTCT GGAGCGCTCG GCACGCCGCA
ACGGATGATC GACGATGGCG GGTGCTCATC GGCATGTTCG TGGTTGGCCT CGCGGGAGGC
GCCCTCATAA CTGCGGTGAC GTTGCTGAAG GGCGACCCGA TCACGTCCGC TGTGACCTCG
GAGTATCTGG GCCTGATTGT CTTCTACGGA CTGGCGCTGG CAGGGCTGTT ATGCCTGCCG
ACCTACCCGG TTGAGGGCCG GGGCGTGCGT GGGCGGGGAG GTGACCTGAG CCGTTGGCAT
GCGATCGTCG CGCTCGACAG CGTACTGATC GTCGGCTCGG TCCTTCTCCT GGAATGGGGG
ACGTCGCTGG AGGCGATCGC ACGGGCAAGC GGGCCCGACC CTGCGCAGCT CCTCGGCGCG
CTCGTCCACC AGCTGTCGGT GCTGATCCTC GCGGCGACTG TGCTGCTGAT CGCGACGTTC
CGCCGACCGC GGTCCCCGGC GACGTTGGCG CTGCTGGGCA GTGGCCTGCT GGCGTACGCC
CTCATGAACA TCATCGTCGT CTACCGCTTC GCCCACGGCC ACTACGACCT TCCGGCGTGG
AGCCTGATGC CGCTCGTCGT CTCCCTCCAG TTGATAGCCC TCGCCGCGCT GGCACCGGTT
CGTGGCCCGG TGGATCGGGA CAGTGCGGCC GCGCCCGGTC CGCGGGCGAT GTGGGCGCAT
GCCGCCTTGC CGTATGCCGT GCTCGGCGTG ACCAGCCTGT TGCCTCTTGG CAAGCTGGTG
GCGGGCACGC CGCTCGACCG GATCGAGGCG TATGGCGCGG TGTCGCTCCT GGCCTTGGCG
TTCACAAGGC AGATGATCAC CATTGCCGAG AACACCCATC TGCTCACCGC GGTGAGGGAA
CGCGAGAAAC AGCTGCACTA TCAGGCGTTT CATGACCCCT TGACCGGTCT GGCGAACCGG
GCGCTGTTCG CCCGACGCCT GCAGCGCGAA GTCGACCATG GCATCGAGCC GAGGAACGAC
GGCGCACCCA CTGGCGGACA GGCCGCTGTC TCCGTTCTGT TCCTAGACCT GGACCAGTTC
AAACGGGTCA ACGACACGTT CGGGCACGCC ACCGGCGACG AGCTTCTCAA GATCATCGCA
GAGAGGCTGC GGGCCGGAAC CCGCGCCAAC GACACGGTCG CCCGCCTCGG TGGCGACGAG
TTCGCGGTCA TCCTCGACGG CGCCGGCCCG GACAAACCAG TCCAGATGGC CGAGCGCCTC
GCGGCCGCGG TACAGACGCC TTGCCAGCTC GCGGGCCAGA CCTACCTCCC ACGCGCCAGT
CTCGGCCTTG TCACCCTCGA CCCCGACGCG CGACCAGCAA GCCCCGACAG CCTGCTCCAC
CAGGCCGACC TGGCGATGTA CGCAGCGAAA CGCGCCCAGA CGAGCAGACT TGTCGTCTAC
GACCGCCACC TGACGGTCCG CCGCGGCCGC GATCAACCGT ACCGTCACTA G
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| Protein sequence | MAGLRVVGGV VPGLLRSADW SHVPRLFRYA LAGCLLYVGL AAVFAALLAP GPAGIATTLV
AFASEVTAAV ACFWSARHAA TDDRRWRVLI GMFVVGLAGG ALITAVTLLK GDPITSAVTS
EYLGLIVFYG LALAGLLCLP TYPVEGRGVR GRGGDLSRWH AIVALDSVLI VGSVLLLEWG
TSLEAIARAS GPDPAQLLGA LVHQLSVLIL AATVLLIATF RRPRSPATLA LLGSGLLAYA
LMNIIVVYRF AHGHYDLPAW SLMPLVVSLQ LIALAALAPV RGPVDRDSAA APGPRAMWAH
AALPYAVLGV TSLLPLGKLV AGTPLDRIEA YGAVSLLALA FTRQMITIAE NTHLLTAVRE
REKQLHYQAF HDPLTGLANR ALFARRLQRE VDHGIEPRND GAPTGGQAAV SVLFLDLDQF
KRVNDTFGHA TGDELLKIIA ERLRAGTRAN DTVARLGGDE FAVILDGAGP DKPVQMAERL
AAAVQTPCQL AGQTYLPRAS LGLVTLDPDA RPASPDSLLH QADLAMYAAK RAQTSRLVVY
DRHLTVRRGR DQPYRH
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