| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2685 |
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| Symbol | |
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| ID | 5671076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3176022 |
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| End bp | 3178142 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641241597 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001507017 |
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| Protein GI | 158314509 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTTCG GTTTGGCTAC CGGCCCGACA GCCGTGGTCG CGACTTGGCA CGCCCTTTGG
GCGGCCGAAC ATGGCTCGGC CATTCCGCAC CAGTTTCCGT GGGCAGCGGG AGCGTTCCTG
CTGATCATCG GGTTGAACTT GGCGGGTGTG CTCGCGTTCC CCACCGATCC GCTCGACGCC
GGAGACAGCG CATTCGCTGT GGCTCGCGAC GGATACCACT GGTACGTGAT CACAGCGCTG
GACAGCCTGG TGGTCGTCGG CTCGATGTTC CTGCTTGCCT GGTGGACAGT CCTGGAGCCG
ATCATCAGGA TGCGACACCC CAGCGCCGTC GGGGTCGTGC TTAACACGGG AGTTGTTGCC
GGTTACTGGA TCCTGCTTAC CGCCGCCCTG CTGCTGTCCA CGTTCCGCCA GCCACGCTCA
GGGCTCGCAT TGGCCCTCCT CAGCGCGGGC GTGAGCGTGA TGATTCTGAC CACAACGATC
GATCTCATCG TGGGCGCCTC GGGTGGGCAC GGCATCCCGC CGATCGTCGA CGTCGTCTCT
GCTGCAGGCT GGCTCCTGGT CCTGCTCGCC TGCCTGGTCC CGATCCCGGA ATCGCCCGTG
CTCGTCCGGC GCGGCGGCAG CCCGCGGACA CTGCGGACAC GCGCCGCCCT TCCATACCTA
GGGCTCGGAG CCGCCGGTGC AGTGGTGGTC GGCCAGGTGA TCGTGAACAG TCCCATTGAC
CGAGTCGAGC GAATCGTGCT GATCGGACTG CTGCTGGTCG TCCTCGGCCG GCAGATCATG
ACCTTGGGTG AGAACGGCCG CCTCCTCGCG TCGGTCCAGA CCAGCCGGCG GCAACTGCAC
CACCAGGCGT TCCACGACCC CCTGACGGGG CTGGCGAATC GAGCGTTGTT CGACGATCGT
CTGCGGCACG CGCTCGCGTC CTGCAGTAGT CGACCATGCG CGCTGGTCTA CTGCGATCTT
GACGACTTCA AACGCGTGAA CGACACGCTC GGCCACGCTG TCGGCGATGC ACTGCTCAGA
ATCACCGCGG CGCGGCTGCG CAACGGCGTT CGATCAGGCG ACACGGTCGC CCGGCTCGGT
GGTGACGAGT TCGCGATCCT CCTCGAGGAC CGCCACAATG GCCCAGAGCC GGAGGCGATA
TGCCGGCGGC TCGCCGCGAT GATCCGGGCG CCGGCCCTGC TCGCGGGACG TTCTTATCCG
GTCGGTGCGA GCATCGGACT CGTTGTCGCG AATGCCAACA GCGCGCCAAC CGCCGATGCC
CTCCTGCGGG ACGCCGACAT CGCCATGTAT GCGGCGAAGA GACAGGGCAA GGGCGGTCTC
GTCGTCTACC GACCCGACCT GTCCACACCC GAATCGGCCC CGCAGACACG AGCCGATCTG
GAGCATGCGC TTCGCGGCGA CGAGCGCTAT GGAACGGTGA AAATCCGCTA CGGACCCGTG
GTCGATCTAC GCACGGGGGA CACGTCCGCC CTCGACGCCG AACCGCACTG GAACCACCGG
GACCTCGGCG AGGTCGCACC CGACCTGCTA TCACGGCTCG CCAACGAGGC AGGGCTGACC
TTGCCTCTTG TCGGCTTTGT CCTGCGAGAA GTCTGCCGCG ATCTGGCGGC GCAGGGTCCA
GGGTCCGTGA CCGCACCCGT CTTCGTCAGC GTTCCCATGA GCCGCGACCT CCAGGAGACA
CCCGTCGTCG ATATCGTGGG TCTCCTCGCT GATCGTGGTC TGTCCCGTAG GGCGATCATC
TTGGCACTCG CCGACGCCTA TGGCATCCCC GACCTCACGG ATGCGGCCAC CGCGCTGCGA
CGGGTCGCCG ACGGAGGGGT CCCTCTTGCC CTTGACGGAG TCGGCGGACA CGCAAGCACC
TTCGCCGCCT GGCACACACT GCCCATCCAG ATCATCAGGC TCGACCGCTC CTTGACCGAT
CTTGACACCG GGCAGGCACA CCAACGCACC CGCCAGGTCC GAGACGCCAT CATTGGCGTC
GCCGCCCAAC TCAACCTGAC TGTCGTCGCC ACTGGGATCA ACACCCCGAT CCAGGCACGC
GAACTCGCGA GGGCCGGCTG CCATCTCGGC ACCGGCCCCC TCTACGATCC GTCTCGTCCC
CTGGGTAAGG CATCGTGCTG A
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| Protein sequence | MIFGLATGPT AVVATWHALW AAEHGSAIPH QFPWAAGAFL LIIGLNLAGV LAFPTDPLDA
GDSAFAVARD GYHWYVITAL DSLVVVGSMF LLAWWTVLEP IIRMRHPSAV GVVLNTGVVA
GYWILLTAAL LLSTFRQPRS GLALALLSAG VSVMILTTTI DLIVGASGGH GIPPIVDVVS
AAGWLLVLLA CLVPIPESPV LVRRGGSPRT LRTRAALPYL GLGAAGAVVV GQVIVNSPID
RVERIVLIGL LLVVLGRQIM TLGENGRLLA SVQTSRRQLH HQAFHDPLTG LANRALFDDR
LRHALASCSS RPCALVYCDL DDFKRVNDTL GHAVGDALLR ITAARLRNGV RSGDTVARLG
GDEFAILLED RHNGPEPEAI CRRLAAMIRA PALLAGRSYP VGASIGLVVA NANSAPTADA
LLRDADIAMY AAKRQGKGGL VVYRPDLSTP ESAPQTRADL EHALRGDERY GTVKIRYGPV
VDLRTGDTSA LDAEPHWNHR DLGEVAPDLL SRLANEAGLT LPLVGFVLRE VCRDLAAQGP
GSVTAPVFVS VPMSRDLQET PVVDIVGLLA DRGLSRRAII LALADAYGIP DLTDAATALR
RVADGGVPLA LDGVGGHAST FAAWHTLPIQ IIRLDRSLTD LDTGQAHQRT RQVRDAIIGV
AAQLNLTVVA TGINTPIQAR ELARAGCHLG TGPLYDPSRP LGKASC
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