Gene Franean1_2684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2684 
Symbol 
ID5671075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3174974 
End bp3175837 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content66% 
IMG OID641241596 
Productamidohydrolase 2 
Protein accessionYP_001507016 
Protein GI158314508 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCATGC CCACCACGCA GCGGGTGATC GACACACTGA TCGGGTTTCG GGCCAGCCAC 
AACATCCCGC CCATCGCCGC GCTGCCAAAC CGGCGCTCCA GCGACAACCC GATCAGCTAC
ATGTTCAAAG GCATCCCCCA AGACCGCGCC GTGGATGCCA CCGTCGAGGA AGCTGTCGAC
GAGACCGTCG CCAAGATGGA CGCCCACGGC ATCGCCGTCG GTCTCGTCAG CCTGACGAAC
GACGCCACCC AGGTCGCCTT GCGGCGCTAT CCCGACCGGT TCGCCGCGTC GCTGGCGGTG
GACGGCAACG ACGTCATGGG CGCTGTCCGG GCCATCCACC ACGCGGTCGA CGAGTACGGC
ATCCGGGCCG TCACGACCTT CCCCTCCGGC GTCAGCCCAC AGCTTCCGAT CGACGATCGT
CACTGGTACC CGGTCTACGC CACCTGCGTC GACCTCGGCC TGCCCGTCTT CGTCTCCGTC
GGCATCCCCG GCCCCAGGGT GCCGATGGCC CCGCAGAAGG TCGAACTGAT CGACCAGGTC
TGCTACGACT TCCCCGAGCT GGTCTTCGTG ATGCGCCACG GCGCCGAGCC CTGGGTCGAC
CTCGCGATCA AGCTGATGCT CAAGTGGCCG AACCTCTACT ACTCGACCAC CGCGTTCGCC
CCGCGCCACT ACCCGCAGGC GATCATCGAC TACGCGAACT CCCGCGGCTC CGACAGGATT
CTCTATGGTG GGTATTTCCC GTTCGGGATC GAGCTCGAAC GGACGTTCAC CGAACTGCCC
GACGTGCCGT TCAAGGACGA CGTTTGGCCG AAGTTCCTCC ACGACAACGC CGCTCGCGTC
CTCAGATACG CCTCCACCAC CTGA
 
Protein sequence
MTMPTTQRVI DTLIGFRASH NIPPIAALPN RRSSDNPISY MFKGIPQDRA VDATVEEAVD 
ETVAKMDAHG IAVGLVSLTN DATQVALRRY PDRFAASLAV DGNDVMGAVR AIHHAVDEYG
IRAVTTFPSG VSPQLPIDDR HWYPVYATCV DLGLPVFVSV GIPGPRVPMA PQKVELIDQV
CYDFPELVFV MRHGAEPWVD LAIKLMLKWP NLYYSTTAFA PRHYPQAIID YANSRGSDRI
LYGGYFPFGI ELERTFTELP DVPFKDDVWP KFLHDNAARV LRYASTT