| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2648 |
|---|
| Symbol | |
|---|
| ID | 5671041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 3133786 |
|---|
| End bp | 3134613 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641241563 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001506983 |
|---|
| Protein GI | 158314475 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5421] Transposase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCGA TCAGTATTCG ATCGACGCGA GTCGTGGCCA ACGCATCGAC GCACCTGGCC
GCTCGACGGT TCACGATGAT TATCAAGGCC TTCATCAGTG TTGACGGCTC GGGTGGTGAG
GTACCGCACT GGCCACCACG TCGGCGGTTT GTCGTTCGTC CTCGGCGCCC GCGTGCCCGA
TGTCCCCTAC GTCGTCAAAG CGTGGCGCGA ACGCCACCCC GGCGCCGAAA TCCCGGACGG
GCATGTGTTC GTCCAGCCGT GGCCCGCCGG CCCCAACCAC ACGGTCTTCT ACCAGTAAAA
GGCCGACCGG GCACGGCGCA CCCTGCGCGG GATCGACCAG CAAGTCGCCA AAGCCGAGAA
CGCCGTCGCC GGGAAGACCC TGGTGAAACG GAACCGGTAC GTGCGCCTCA CCGGCGCCAG
CAAGTTGGTC AACCGCACGC TGGAAGCCGA GAACCGCGAC CTGGCAGGCA TAAAGGGCTA
CGTCACCAAC CTGCCAGACC TCGCGACGCC CAACAGGTCA TCAGCACCTA CAGCCGGCTG
CTGAACGTCG AGAAGAGCTT CCGGATGAGC AAGTCCGACC TCGCCGCCCG GCCCGTCTAC
CACCACAAAC GCGAATCGAT CGAAGCCCAC CTGACCGTCG TGTTCGCCGC CCTCGCCCTA
AGCCGCTGGA TGGAGAACAC CACCGGTTGG CCCATCCGCA AGTTCGTTAG GACCGCCCGC
CGCTACCGCA GCATCACCAT TCAGGCCGGC GAACACACCA TCACCGCTGC CGACCCCCTG
CCCGACGACC TACGAACCGC CCTCGCCGCC GTCCACGGCA CGCACTAA
|
|---|
| Protein sequence | MRAISIRSTR VVANASTHLA ARRFTMIIKA FISVDGSGGE VPHWPPRRRF VVRPRRPRAR
CPLRRQSVAR TPPRRRNPGR ACVRPAVARR PQPHGLLPVK GRPGTAHPAR DRPASRQSRE
RRRREDPGET EPVRAPHRRQ QVGQPHAGSR EPRPGRHKGL RHQPARPRDA QQVISTYSRL
LNVEKSFRMS KSDLAARPVY HHKRESIEAH LTVVFAALAL SRWMENTTGW PIRKFVRTAR
RYRSITIQAG EHTITAADPL PDDLRTALAA VHGTH
|
|---|
| |