Gene Franean1_2618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2618 
Symbol 
ID5671012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3100139 
End bp3101452 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content69% 
IMG OID641241534 
Producthypothetical protein 
Protein accessionYP_001506954 
Protein GI158314446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.190831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGTTGA ACTTCCTGGA GGTGTTCGGG CGGCGATGGG ACGCGGCGGC GGCGGGTGAC 
GTGGAAGCGT TCAAGGACTG GCGCTTGACC GACCAGGCGA ACGACGGCCG GATCGCGCCA
GCCAGCTTCG ACGCCGACCG TGCAGCGCTC AACTGCTTCT ACTCGTGGGC GTCGGCGCGC
TACGGCGTGG TCAACCCGGT TCCGTCCGGA CGGTGGGCGC GGACCGGACG GTCGTATGGC
GCAGCCGAAC CTCGGTGGGG GTCTCGTGAC CCGCTGCGGC CGGCCGGCGC GGCGAAGAGG
CAGGTGAAGT GGCTGTTGCG GTCGGCGTTC GAGCAGTGGC GGGACGTCGG TCTGCGCGGG
TACGGCTTTG ATGACGTCCG TCATCCGGAC TGGCGCGGTC CGCACGAGGA CCGGGACGCC
GCGTTCGTCG ACGGCCTGTA CGGGACGGGG CTGCGGCTGA CCGAGTGGGC GACGATTCTC
GACGTGGAGC TTCCCGGTCC GGGTGGAGAG CCGTACCCGC GGGCGTGGCT GGCCGCGGCG
TGCGCGAAGG GCGGCCGGCA CGGGCGGGTC TACCGGATAC CGCGCCGGGC GCTGACGGAG
GTGCACGGCT ACCTGGACCC GCGGGAAGGC TCCCGAGCCG AAAAGGTCCG CCAGGCCCAG
CGGTCCGGCC GTTACGAGCG GCTGGCGGTC CGACGGATTG TCACCGGCTA TAACCCCCGC
GCCCGCACCC TCACGGTGGA GGGCTCGTCC GGGCTGACTC GGATATCGGT GGACGTGCTC
CGCCCGCACG AGCGCCGGTG TTTCTTCAGG CAAACAGAAT GCGGTCTGGA GCCGCTTGCG
CTCTGGCTCG GCCGTGACGG TCTCCCGAAA CATCCACATG GTTGGGAGGA CACGTTCACC
GCCGCCAACA GGCGTATCGA ACGGGCGTGG TTCGCCGCCG GCCACAACAG TACGGCACCG
TTGTGGTGCA CGCCGCACAT GTGCCGGCAC AGTTTCGCGC TGAAATGGTT CTCGGTCCTG
TCGCTGGTGT GGGACAACCG GCTGAGCGGG TTCAGCGCCG AGGAACTCAA GGACTATCGG
GCGCAGTTCG GCGACATCTG GTACCAGCTC GCCGGTCTAC TTGGGCACGC CGACCCGTCC
ACAACGCGCG AGCACTATCT GGAACCGTTC ACCAGTCTGG ACGTCGACTA TCTGATGGCA
CTGCTGGACA CCGAGGAACA GACCACCGTC GACACGCTGT TACGCGCGGT GGCCGCCGAT
AGCGGACGCA CCCTCACCAC GGTAGTTGCC GCCGACGCGG GGACAGCGGG GTGA
 
Protein sequence
MWLNFLEVFG RRWDAAAAGD VEAFKDWRLT DQANDGRIAP ASFDADRAAL NCFYSWASAR 
YGVVNPVPSG RWARTGRSYG AAEPRWGSRD PLRPAGAAKR QVKWLLRSAF EQWRDVGLRG
YGFDDVRHPD WRGPHEDRDA AFVDGLYGTG LRLTEWATIL DVELPGPGGE PYPRAWLAAA
CAKGGRHGRV YRIPRRALTE VHGYLDPREG SRAEKVRQAQ RSGRYERLAV RRIVTGYNPR
ARTLTVEGSS GLTRISVDVL RPHERRCFFR QTECGLEPLA LWLGRDGLPK HPHGWEDTFT
AANRRIERAW FAAGHNSTAP LWCTPHMCRH SFALKWFSVL SLVWDNRLSG FSAEELKDYR
AQFGDIWYQL AGLLGHADPS TTREHYLEPF TSLDVDYLMA LLDTEEQTTV DTLLRAVAAD
SGRTLTTVVA ADAGTAG