| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2602 |
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| Symbol | |
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| ID | 5670996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3080603 |
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| End bp | 3081187 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641241518 |
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| Product | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase |
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| Protein accession | YP_001506938 |
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| Protein GI | 158314430 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.031675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACC GCGTTACGCT CATCACCGGA AACGCAGGCA AGGCCCGCGA GTACGCCAGC
CTTCTGGGCA TCGGGGTCGC CGCGACCACG ATGGACCTCA TCGAGATCCA GTCCCTCGAC
GTCGCGAAGG TGGTGAAGTA CAAAGCCGAG GACGCCTACA CGAAGCTGCA CAGCCCGGTG
CTCGTCGATG ACACCGGCCT GGCGCTGCAC GCCTGGAACG GCCTACCAGG CGCTCTCATC
GCATGGTTCC TCGACACCGT CGGAACCCGG GGCCTCCTCA GCATGGCGGC CGGCGTAGCC
GATCGAAGCG CGGCTGTCAC GACCGCTCTC GGCTACGCCG ACGACACCGG TGTCCGGGTC
TTCACCGGCA CCGTCCACGG GATACTCACT ACCGAACCGC GCGGCAACGG CGGCTTCGGC
TACGACACCG TCTTCGCACC CGCCGGGGCC ACACTCACCT TCGCGGAAAT GTCAAGCGAG
CAGAAGAACG CGATCTCACA TCGCCGGCTA GCAGTCGACG CCCTCCGCAA GGGCCTCGGG
ATCTCCACCT CCGAAAACCC TGCGTCGGCG GGACCGCGAC CGTAG
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| Protein sequence | MIDRVTLITG NAGKAREYAS LLGIGVAATT MDLIEIQSLD VAKVVKYKAE DAYTKLHSPV
LVDDTGLALH AWNGLPGALI AWFLDTVGTR GLLSMAAGVA DRSAAVTTAL GYADDTGVRV
FTGTVHGILT TEPRGNGGFG YDTVFAPAGA TLTFAEMSSE QKNAISHRRL AVDALRKGLG
ISTSENPASA GPRP
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