| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2594 |
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| Symbol | |
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| ID | 5670988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3073287 |
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| End bp | 3074738 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641241510 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001506930 |
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| Protein GI | 158314422 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCC CGTCCTGGCA CGACCCGCAC CGACCAGCTG CGTCCGGGAA CGGTGCGGGC
TGGCCCGGTC CGCTCGTCCC CTGGGACGGC GCCGGCGGTG GGGGCCCGGC TGCGCCGACC
GATCTTCCCG GCCGTGCCTC CGGCTCAGCG GCCGACGCCC TGCGCCTTCG GCTCCGTGAC
GGACTGCGGG CCGCGCTCGC CCGTCGGCTG CGGGCGGACG AAGACGCGGG CTCCCCGCCG
CTGACCGCGC AGGCACGCGA GGCGTTCGCC CGCTCCGTGC TCGTGGACCT GACCGAGGCC
CACACCACCG CCGAGCTGGC CCGCGGAGCG GCGGTCCTGA CGCCCGAGGA CGAGCAGCGC
GTCATTCACG AGGTCCTCGC CGAGGTCCTC GGGCTCGGCG GCCTCGAACC GCTCCTGGCT
GATGCCAGCA TCGAGAACAT CAACATCAAC GGTGATCGGG TGTTCATCCG CCGGGCGGAT
GGCAGCCGGC AGCGGCTTCC GGCGATCACC GGCTCGGATG CTGAGCTGGT CGGGCTGATC
CGTGACCTGG CAGCACATGC CGGGGTGGAG GAGCGGCGTT GGGACCGCGG CGCCCCCATG
GTCAATTTTC ATCTGGCCGA CAAGAGCCGC GTGTTCGCGG TCATGGCCGT CACCCAACGG
CCTTCCGTCA GCATCCGGCG GCACCGGTTC CGCCACGTCA CCCTGTCCGC GCTGCGGGCC
AACGGCACGA TCGACTACGG GCTGGAGGGT CTGCTCGCGG CGCTGGTGGC GGCGCGGAAG
AACATCGTGG TCGCCGGGGG CACCGCGATC GGGAAGACTA CGATGCTGCT CGCCTTGGCC
GACCAGATCC CACCGTCGGA GCGGTTGGTG ACGGTGGAGG ACGTCTACGA GCTCGGGCTC
GACGCCGACG AGCGGGCTCA CCCGGATGTG GTCGCCATGC AGGTGAGGGA ACCCAACACC
GAAGGCGAAG GCGCGATTTC TGCCTCAGAC CTGGTCCGGG CGGCGTTGCG GATGTCCCCC
GACCGGGTGA TCGTCGGCGA GGTCCGCGGG CCCGAGGTCA TTCCGATGCT CAACGCCATG
AGCCAGGGCA ATGACGGATC GATGACCACC CTGCACTCCT CGACTTCCCG CGGGGTGTTC
AGCCGGCTGG CCTCCTACGC CGTACAGGGC CCGGAACGGC TGCCCGTCGA GGCGACGAAC
CTGCTGATCG CCAGCGCGAT CCATGTCGTT GTCCATCTGG CCGAGCCGCG CGGTGAACCG
GGCCGCCGCG TCGTCTCGTC GGTGCGAGAG GTGGTCGACG CCGACGGTGT GCAGATCGTG
ACAAACGAGT TGTACCGGCC GGGTCCCGAC CGCCGCGGCC TGCCGGCGGC ACCGCCGACC
GGGGAGCTGC TCGACGACCT GATCGACGTC GGTTTCGACC CGGACCTGCT TGCCCGGGGG
TGGTGGGGAT GA
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| Protein sequence | MTVPSWHDPH RPAASGNGAG WPGPLVPWDG AGGGGPAAPT DLPGRASGSA ADALRLRLRD
GLRAALARRL RADEDAGSPP LTAQAREAFA RSVLVDLTEA HTTAELARGA AVLTPEDEQR
VIHEVLAEVL GLGGLEPLLA DASIENININ GDRVFIRRAD GSRQRLPAIT GSDAELVGLI
RDLAAHAGVE ERRWDRGAPM VNFHLADKSR VFAVMAVTQR PSVSIRRHRF RHVTLSALRA
NGTIDYGLEG LLAALVAARK NIVVAGGTAI GKTTMLLALA DQIPPSERLV TVEDVYELGL
DADERAHPDV VAMQVREPNT EGEGAISASD LVRAALRMSP DRVIVGEVRG PEVIPMLNAM
SQGNDGSMTT LHSSTSRGVF SRLASYAVQG PERLPVEATN LLIASAIHVV VHLAEPRGEP
GRRVVSSVRE VVDADGVQIV TNELYRPGPD RRGLPAAPPT GELLDDLIDV GFDPDLLARG
WWG
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