Gene Franean1_2588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2588 
Symbol 
ID5670982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3068386 
End bp3068922 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content71% 
IMG OID641241504 
Producthypothetical protein 
Protein accessionYP_001506924 
Protein GI158314416 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0661216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCCGG TCGAACTCTG GCCACCAAGA ACATCCGTGC GCACAGGCTC TTCACCTCAC 
GCAGGAACTC GCGACATGGC TGACGCAGCT GGGACAGGCA CCGTGAGTCT GCGACAGCCC
AGTCGCCGCG GCCGGGACGA GGGGACCGTG ACCGCGTTCG TGGTGGTGCT GTTCGGCGCG
TTCGTCATGT TCGGCGGGCT GATCGTGGAC GCGGGTGGTG CGCTGGCCGA CAAGACCACC
GCGATGGGCC TCGCGCAGGA AGCCGCTCGG GCCGGCGCCC AACAACTCGA CCTGACCGCC
TTCCGCGACA GCGGTACGGT CCGGCTGCTG CCCGAGCCTG CGATCTCCGC CGCCCAGTCC
TACCTCACCC AGGCCGGCGC CACCGGCACC GCGACCGTCG TGGACAACAC GGTCACCGTG
ACCGTGACCG CTGTGCACGA CACCCTGCTG CTGGGCGTCG TCGGGCTCGA CACGCTCACG
GTCACCGCCA CCGGCAGCGC CCATCCCGCC CCACCTGCCG CCGGAGCGGC CCCGTGA
 
Protein sequence
MWPVELWPPR TSVRTGSSPH AGTRDMADAA GTGTVSLRQP SRRGRDEGTV TAFVVVLFGA 
FVMFGGLIVD AGGALADKTT AMGLAQEAAR AGAQQLDLTA FRDSGTVRLL PEPAISAAQS
YLTQAGATGT ATVVDNTVTV TVTAVHDTLL LGVVGLDTLT VTATGSAHPA PPAAGAAP