Gene Franean1_2577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_2577 
Symbol 
ID5670971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3057277 
End bp3058284 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content70% 
IMG OID641241493 
Producthypothetical protein 
Protein accessionYP_001506913 
Protein GI158314405 
COG category 
COG ID 
TIGRFAM ID[TIGR03299] phage/plasmid-related protein TIGR03299 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGG AAACCCTGAC CTGGCTGAAC GACAACACGC TGATCGGTTT CACCGACAAG 
CGTGGCCACG CCTGGCACTA CCGCGCCGAC CAGCAGCAGG GCGAGGCCAA CCACTACCCC
GGGCCGATCC CGGTCGCCGA CGTGGAGCGC CGGCTGTTCG ACTGGCGGGC CCTCGAACAG
CCGATCTACG TCGAGTCCCC GGTCACCGGC GGCCTGGACG TCGTCCCGGA CCGCAAGGCG
ATCATCCGGT CCGACACCGG CAGCGTGATG GGGATCTTCA GCGACGGCTA CCAACCCCAC
CCCTACCAGG AGTGGCTGGT CGACAACGTC GCCCAGCTCC TCGACGACGA TCTCGCGATC
GGCTCAGCCG GGCTGCTGCG CGGCGGGGCG GTGGCGTGGG TGTCGGTCGA GGTGCCCGAC
ACGATCACGA CCCCGGAAGG GGTCGCGTTC CGCCCGAACC TGCTGGCCAC CACATCGTTC
GACGGGTCGC TGTCCACGAC CTACAAGCGG ATCGTGACCA ACGTCGTGTG TGACAACACG
ATGGCGGCCG GTCTGCGGGA GAAGGGCCAG CAGACCAAGG TCAAGCACTC CGCGAAGTCG
CATCTGCGTC TCGGGGAGGC CCGGCAGGCA CTCGCGATCG TGCACACGAT CGCCGACGAC
TTCGCCGCCG AGGTCGCCGA ACTGTGCGCG CTCGACGTCT CGGACCGGCA GTGGGCCGCG
TTCCTGGACG CCCACGCCCC GATGCCGGAG GAGAAGGGGC GGGCGCGGAC CAGCGCGGAG
AAGCACCGCG ACACCTTCAA CCGGCTGTGG AATCACGATG AGCGGGTCTC GCCGTGGCGG
GGCACCGGCT GGGGCGTGGT GCAGGCGGTC AACACCTACA CCCACCACGA GCAGACCGTC
CGCGGTGCGT CCCGCGCCGA GCGCAACATG CTGCGGGCCG TGACCGGCGG GGCGGACAGC
CTCGACGGGT CCACCCTCGC CACGCTGCGC ACCCTGCTGC CGGCCTGA
 
Protein sequence
MSKETLTWLN DNTLIGFTDK RGHAWHYRAD QQQGEANHYP GPIPVADVER RLFDWRALEQ 
PIYVESPVTG GLDVVPDRKA IIRSDTGSVM GIFSDGYQPH PYQEWLVDNV AQLLDDDLAI
GSAGLLRGGA VAWVSVEVPD TITTPEGVAF RPNLLATTSF DGSLSTTYKR IVTNVVCDNT
MAAGLREKGQ QTKVKHSAKS HLRLGEARQA LAIVHTIADD FAAEVAELCA LDVSDRQWAA
FLDAHAPMPE EKGRARTSAE KHRDTFNRLW NHDERVSPWR GTGWGVVQAV NTYTHHEQTV
RGASRAERNM LRAVTGGADS LDGSTLATLR TLLPA