| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2542 |
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| Symbol | |
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| ID | 5670936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3021334 |
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| End bp | 3022998 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641241458 |
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| Product | integrase domain-containing protein |
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| Protein accession | YP_001506878 |
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| Protein GI | 158314370 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTCC ACGACAGACC GCGCGCCAAC AGTGCCAAGA CCGCGACCAG TTGTCTGTCG
TGCCTGGCCT GGGGGTTGCC GTGTCGGCGA GGGAAGTGCC GAGCCTGCTG CGACTTCGTC
GCACCCCGCT ACGGCCATGC GGTCGGCGAG TGCGGTGCCT GCCGTCGGCG GGAGCCGCTG
AAGAAGGGGT TCTGCCGGTT GTGCTGGTGT CAGGCACGCC TGGAACGCAC GACGGGCACC
TACAAAATGC TGATGCCCCA CGTCCGTCTG GTCCGCCATC ATCAGCTGTT CTTCGCCGAC
ATGGCCGGCT ACCGAGACAC CCACACGGCC CCGCGACGTT TCGACGAGAC CGGTCGAAAA
CCCCCGCCGC CACCCGCTTA CCGGCCCGAG ACCCGCCACG TCCAGCCGGC TCTGTCCGAC
GACGTCGTTC GCCGGCACTA CCGGTACGGA CGTTACGACC TGCGCCGAGG ACCGGCGCCT
GACAACCCGT GGTTGGCCTG GGCGCTTTAC ATCGCCTATG ACCTCGCTGA GAAAAGGGGA
TGGGGATCGT TCGTCCGAGG TGGAATGCAA CGGACCCTGG TCATGCTGCT GGCCGGCCAC
ATCGACGGAG AACTGATCCG CGTCAGCGAC TTCTACGAGA CCGTGGCCGA GCACTCCACG
AACATCGACG ACACCATCGA GATCCTCACC GTCATGGACG TCGTCCTCGA TGACCGGGAA
CAGGCTTTCG ACCGGTGGCT GCGAGCTGAA CTCGACGGGC TCGCCCCAGC AATCCGACGG
GACACCCATA CCTGGACCAC GTTGCTGCAC AATGGCGGCC CGCGGAACCG AGCCCGTGCG
CCGGGCACCG CCGCTGACTA CCTGCGCACC ATCCGGCCCG CGCTGACGGC CTGGTCGACC
CGCTACGGCC ACCTGCGGGA GGTCACCCGT GACGACGTCA TCGCCTACCT CGAACCGCTG
ACCGGCCCGC CGCGGGAGAG GGCCACGACC GCCCTGCGGT CGCTGTTCGT ATGGGCGAAA
CGCGCCAATG TCATCTTCCG TAACCCCGCC GTCCGCCTGC GCGTCCCACA GCGAGCAGAC
CCGGTCTGGC AACCGCTGCG CCCGGACGAA CTCGCCCGCA CCGTCGCGAC GGCCACCACC
GTGCACGCCC GCCTGTTCGT CGCCCTCGCC GCCGTCCACG CCGCCCGCGT CGGACAGATC
CGCGCCCTGC AACTCGACGA CGTCGACCTC GGCAACCGAC GCATCACCAT CGCCGGCCAT
GACCGGCCAC TGGACGACCT CACCCACCAG ACCCTGCTGG CGTGGCTGGA GCACCGCCGG
ACCCGCTGGC CAGTCACCGC CAACCGCCAC CTGGTCATCA GCCCATGCAC CGCCGGAGGG
CTCGGACCCG TCAGCTACCC CTGCCTCGCC CGCCCGCTGC GCGGGCTGCC CGCGACCCTC
GACCGGCTCC GTGTTGACCG GCAGCTCGAG GAGGCACTTA CCTCCGGCGC CGACCCCCTG
CACGTCGCCG CGGTCTTCGG CGTCAGCGAC GCCACCGCGA TCCGCTACGC GGACAATGCC
CGTCAGCTCC TGGCGCGCCC TCACGAGAGC GGTCCCTCGG GATCGCCGCG AACCCAAGGG
TCCAGACCCG GCAAAGAGCC TGATCGACAC TTCAGTTCCC GCTGA
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| Protein sequence | MTLHDRPRAN SAKTATSCLS CLAWGLPCRR GKCRACCDFV APRYGHAVGE CGACRRREPL
KKGFCRLCWC QARLERTTGT YKMLMPHVRL VRHHQLFFAD MAGYRDTHTA PRRFDETGRK
PPPPPAYRPE TRHVQPALSD DVVRRHYRYG RYDLRRGPAP DNPWLAWALY IAYDLAEKRG
WGSFVRGGMQ RTLVMLLAGH IDGELIRVSD FYETVAEHST NIDDTIEILT VMDVVLDDRE
QAFDRWLRAE LDGLAPAIRR DTHTWTTLLH NGGPRNRARA PGTAADYLRT IRPALTAWST
RYGHLREVTR DDVIAYLEPL TGPPRERATT ALRSLFVWAK RANVIFRNPA VRLRVPQRAD
PVWQPLRPDE LARTVATATT VHARLFVALA AVHAARVGQI RALQLDDVDL GNRRITIAGH
DRPLDDLTHQ TLLAWLEHRR TRWPVTANRH LVISPCTAGG LGPVSYPCLA RPLRGLPATL
DRLRVDRQLE EALTSGADPL HVAAVFGVSD ATAIRYADNA RQLLARPHES GPSGSPRTQG
SRPGKEPDRH FSSR
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