| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_2540 |
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| Symbol | |
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| ID | 5670934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3019940 |
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| End bp | 3021007 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641241456 |
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| Product | integrase family protein |
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| Protein accession | YP_001506876 |
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| Protein GI | 158314368 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTCGCG ACCTGCGGGA CCAGCGGCCA TCGGCGGCGT CTGCCGACGA GTTGGCGATG
TTCGAGACGG ACGTGCTCGC GGGGTTCGTG CTCGCCCGGT CGTCGGCCGG GCTGACGGAC
GGGACGATCC GTAGCGACGT CGGGAACCTG GAACAGATCC GCTCCTGGTT CGGCCGGGCG
CTGTGGGAGA TGGAGCCAGC CGACGCCGAC GTCTATTTCG GTCGGGTGCT GCGGGGTTCG
CCGAGTGGGA CACGGCTGGC CAGGGCGGCG GCACTGAGCA CGTACTTCGA GTTCGTGGAG
TTGCGCCACA AGGTCGAGAT TCACAGGATG ACCGGACGCG TCGTTCAGTG TCCGCTGGAT
GAGATGAACC GGCCGCGTGG AAGCAAGGAC GCGCGACTGC GGATTCCGCC GGTCGATCGC
GAGATTGCCG AGTTGTTCTC CGGCTGGTCG CGCGAATTGG CGACCTGCCG GAAGTTCGCT
CCGAGCGCTC GCAACTACAC CGCGGCGCGG CTGATGGCGG AGGTGGGACT GCGGGTGAAC
GAGGCCCGCT CGCTGGATCT CGCGGACATC CGATGGGAGC TGGGCCGCTT CGGCAAGCTC
CATGTCCGTC ACGGCAAGGG CGCGCACGGT TCGGGGCCGC GAGAACGGAT GGTGCCGCTG
ATCAACCATG CGGGGCAGAC GCTGCGCTGG TACGTCGAGG ACGTGTGGGG TCACTTCGAC
GAGGACCACA CCCGTCACGG CGCTCCGCTT TTCCCTTCCG AGCGGCGCAA TGTCGACGGT
GCACCCGCAC GTGTCGGCTA TGACGCGTTG CGTTCGGGGT TGGCCGCCGC CGCGGCCGAG
CACCTCCCCG CGTGGAAAAG CAGGCTCACT CCCCACATTC TGCGTCATTA CTGCGCTTCC
CAGATGTACC TCAACGGGAT CGATCTTGTT TCGATCCAAG AGATGCTCGG GCATTCCTGG
GTGGCTACGA CAATGCGTTA TGTTCATGTG CACCGCACCC GCATCGAGGA CGCCTGGATC
GCGGGGCAGG GGCGAGCCGC ACAGCGGTTG GAAGGGCTGG TCCAGTGA
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| Protein sequence | MVRDLRDQRP SAASADELAM FETDVLAGFV LARSSAGLTD GTIRSDVGNL EQIRSWFGRA
LWEMEPADAD VYFGRVLRGS PSGTRLARAA ALSTYFEFVE LRHKVEIHRM TGRVVQCPLD
EMNRPRGSKD ARLRIPPVDR EIAELFSGWS RELATCRKFA PSARNYTAAR LMAEVGLRVN
EARSLDLADI RWELGRFGKL HVRHGKGAHG SGPRERMVPL INHAGQTLRW YVEDVWGHFD
EDHTRHGAPL FPSERRNVDG APARVGYDAL RSGLAAAAAE HLPAWKSRLT PHILRHYCAS
QMYLNGIDLV SIQEMLGHSW VATTMRYVHV HRTRIEDAWI AGQGRAAQRL EGLVQ
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